Caenorhabditis briggsae (nematode): CBG_23859
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Entry
CBG_23859 CDS
T01054
Name
(RefSeq) Protein CBG23859
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00240
Pyrimidine metabolism
cbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CBG_23859
Enzymes [BR:
cbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
CBG_23859
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
CBG_23859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
8589952
NCBI-ProteinID:
XP_045091185
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MYSRLLTTQKRKFSKFLQISNPVKEALANGEAVVALESTVITHGLPYPQNLSTAKSLEQK
VRASGSQPATIALFDGKIHVGLDDEKLEKLASSQNAVKVSTRDIAKTLIRKEIGGTTVAS
TMKIAHAAGISIFATGGIGGVHRGADQTFDISADLQELSQTPVCVVCSGVKSILDIPKTV
EYLETHSVNCVVYGEENVFPSFFTRKSGSKAQFQTESLEEVVQLLKTSNTLGLPFGTLLA
CPIPEKYAADGDLIQNAIDQAIREAIEQNIASQQVTPFILARINELTKGASMKTNIALLE
NNASIAGRLAAKLCDRRPIAISKMDRNQSSMGAKPKVVSIGAAIVDFEAITSEDVKDDGG
SYNGRVVQRMGGVARNHAEASARLGCESIFISAIGDDQNGQFFRQNSEKIDITRVKTIIN
KPTCTYLAVNIKKNVRYGIVTSEPLLSTLTPNLIDDNSDVLECSDFILLDSNLPVPLMSK
ALEIAKKHEKQVWLEPTDIDKVKKVFSTGLVDAVTATSPNANEFLEWAKLCNVKVDPSIV
NSAESVLELIEKEKTRLILNTSLFVVTLANKGSAVVYRNKLGQLEFQALPPPLQMGKVVS
VSGAGDSFNSGVIAGLTHNKSVVESLQLGQECARLTLQTTLAVSEAITSQLLK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtattctcgtcttttgactactcaaaaacggaaattttcaaagtttttgcaaatttcg
aaccctgttaaagaggcgttagctaatggagaagcagttgtggcattggaaagtacggtt
atcacccatggattaccgtatccacaaaatttgagcaccgccaaaagtttggagcaaaaa
gtgagagcatctggaagtcaacctgccactattgcgctatttgatgggaagatccatgtt
ggcctagacgacgagaaacttgaaaaacttgcttccagtcaaaatgcggtaaaagtttcc
actcgagatatcgctaaaactcttatcaggaaggaaatcggtgggactactgtagcttcc
accatgaaaatcgcacatgccgccgggatcagtatatttgcgacaggtggaattggagga
gtgcatagaggagctgatcagacattcgacatctcagctgacctccaagagctctctcaa
accccagtgtgtgtagtttgctcaggtgtaaagagtattttggacattccaaaaactgtg
gaatatctggaaactcactccgtcaattgtgtagtttatggggaggaaaatgtatttcca
agctttttcactagaaaatctggaagcaaagctcaatttcaaacggaaagtttagaagaa
gtcgtgcaacttttgaaaacatcgaacactttgggtctcccatttggaactctcttggcg
tgtccgattccggaaaagtatgcagctgatggggatttgattcaaaatgccattgatcaa
gcaatcagggaagctattgaacaaaacattgcctcacaacaagtcaccccattcatcctg
gccagaatcaatgagctaacaaaaggagcatctatgaagactaatatcgctcttctggaa
aataatgcgtcaattgcgggtagactagctgcaaaactttgtgatcggagacccatagct
atttcaaaaatggataggaatcagtcgtcaatgggggcgaagcctaaagtggtgtccatt
ggagcagctattgtggatttcgaagccatcactagcgaggacgttaaggacgacggagga
tcctataatggacgtgtggttcaaaggatgggtggagtagccaggaatcatgcggaggcg
tcggcgaggcttggctgtgaatccatttttatctctgctattggtgacgatcaaaatgga
cagttcttcaggcagaatagtgagaaaattgacatcacccgtgtgaaaacgatcatcaac
aagccaacatgtacttatctggcagttaatattaaaaaaaatgttagatatggaattgtg
actagtgagccactgctgagcacgttgacaccgaacttgatcgatgataattcagacgtt
ctggaatgctcagattttattctgctggattcaaatctaccagttccattaatgtcaaaa
gctttagaaatcgcaaagaaacatgagaagcaagtctggctcgagcccacggacattgac
aaggtcaaaaaggtattctcaactggtctggtggatgcagtaactgccacgtcaccaaat
gccaatgaatttttggaatgggccaaactttgtaatgttaaagtggatccttctatagtg
aattcagctgagagtgtattggaattgattgagaaggagaagacacggttgattttgaat
acttcgctttttgtggtgacattggcaaataagggatctgcagttgtttataggaacaaa
ttgggtcagttggaatttcaagcgcttcctccgccgcttcaaatgggcaaagtggtttcg
gtttcgggtgctggtgatagcttcaacagtggagttatcgccggattaacgcataacaag
tcagttgtggaatccctacagcttggccaagaatgtgctagactcacgctacaaactaca
ttggcagtatctgaagctattacatcacaattattaaaataa
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