Corvus brachyrhynchos (American crow): 103611401
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Entry
103611401 CDS
T08418
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04010
MAPK signaling pathway
cbrc04020
Calcium signaling pathway
cbrc04510
Focal adhesion
cbrc04518
Integrin signaling
cbrc04540
Gap junction
cbrc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103611401 (PDGFRB)
04020 Calcium signaling pathway
103611401 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
103611401 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103611401 (PDGFRB)
04540 Gap junction
103611401 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103611401 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cbrc01001
]
103611401 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cbrc04090
]
103611401 (PDGFRB)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103611401 (PDGFRB)
Protein kinases [BR:
cbrc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103611401 (PDGFRB)
CD molecules [BR:
cbrc04090
]
Proteins
103611401 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
BACON_2
DUF4452
Motif
Other DBs
NCBI-GeneID:
103611401
NCBI-ProteinID:
XP_008627134
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MLCPTLKTCLGLLILTGMLQVTFGDSKLHIEPRDTELVLSLHSSFSLLCYGDRELVWERE
GQPLAASLEHRDGVFVSNLTLRNVTGHHTGEYTCTYSPEQAPEPADRKTLYIYVPDPSLV
FLPVATSEELFIFMTGYTEAVIPCRVTNPQMQVTLYEKKVENPIPATYDPQQGFKGFFED
KSYFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENITVMCTVSGNELVNF
NWDYPRKQAGEAVEPVTDFLPGSTHEIRSILIIQNAELEDGGTYVCNVSEGYHEKTDLKD
ITVQVIERGFVHFHTHVPSTVYAEVHKSHTIQVELEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNESAEIGVQTNASYHA
ERQLYRVNSTLQLHRVHEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTPKEDHV
HSHLSMSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYNIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPVLNNARLAASSPTSSILYTAVHQNGGENDYI
IPLPDPKPEASCDLPQEASISRASSMLNEANTSSTISCDTPLGLRQDEEQESDPQPGCQE
PTTGLQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccccactctcaagacgtgtctcgggctcctcatcctcaccggtatgctgcag
gtaacatttggggacagcaagctgcacatcgaacccagagacactgagcttgtcctcagc
ctccacagcagcttctccctcctgtgctacggggacagagagctggtctgggaacgtgag
gggcagccccttgctgcctcgctggagcacagggacggtgtcttcgtcagcaatctcacc
ctcaggaacgtgacaggccatcacactggggagtacacgtgcacctacagccctgagcag
gctccagagccagcggacaggaaaaccctgtacatctacgttccagatccctccttggtt
ttcctccccgtagccacctctgaagagctcttcatcttcatgacgggctacacagaggct
gtcatcccatgtcgtgtgaccaacccacagatgcaggtcaccctctatgagaagaaggtg
gagaaccccatcccagctacatatgatccacaacagggattcaaaggcttctttgaggat
aagagctatttctgccggacattcgtggatgaccaggaggtggattcagacactttttat
gtctacaggatccaggtgtcatctgtgaacgtctccatcagcgcggtgcagaccatggtg
cgccagggagaaaacatcaccgtgatgtgcaccgtgagcggcaacgagctggtcaacttc
aactgggattatccccgcaaacaggcaggggaggctgtggagcccgtgactgacttcctg
cctggatccactcatgagatccgctccatcctcatcatccagaatgcagagctggaggac
ggtggcacctatgtctgcaatgtctccgagggctaccatgagaaaacagacctgaaagac
atcaccgtccaagtgatcgagcgtggctttgttcacttccatacccacgtgcccagcaca
gtgtacgctgaggtccacaagagccacactatccaggtggagctggaggcttatccccaa
cccagcattgtgtggttgaagaacaacaagacattgaccatggagagcagcagtgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtacgg
gtgaagcaggaagaaggaggattttacaccattcgggcttccaatgaagatgatgagcag
gagctctccttccatctgcagataaatgtgccagctaaagtggtggatctcaaggagaac
agcagtgccagcagtggggagcagactgtaacatgctctgctgaaggcatgccccagccc
gagatcagctggtctacttgcagcgacatcaaatggtgcagcaccaagggacagcccacc
cggcttctggggaacgagtcggccgagatcggcgtgcagaccaacgcctcgtaccacgcg
gagcggcagctgtaccgcgtcaacagcaccctgcagctgcacagggtgcacgagcccctg
ctcctcaggtgcaccgtgcagaacttcctgggcaccaactcccaggacatcactctggtc
ccacatgccttgccattcaaggtggtcatcatctctgtcatcctggccttgctggtcctc
actgtgatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcagtcagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccgtatgactccacctgggaggtgcccagggacaagctggtgttaggacgc
actctcggctccggtgccttcggtcgtgtggtggaggcaacagcccatggcctgagccat
tcacagtccaccatgaaagtggcagtcaagatgctcaagtccacagcccgcagtagtgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatt
gtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatcaccgagtactgc
cgctacggggacctggtggattacctgcaccgcaacaagcacaccttcctgcagtcctac
ggagagaaggcacggcgagaggcggagctctacgggaacacacccaaggaggaccatgtg
cacagccacctctccatgtctgtcgagagcgacgggggctacatggacatgagcaaggac
gactccctagactatgtgcccatgtctgacatgaagggtgaagtcaagtacgctgacatc
gagtcctctaactatggcaccccctatgagctggacagctactccccctcagctcctgaa
aggacagaccgggtgacactgataaatgagtctccgctcctcagctacatggacttggtg
ggcttcagcttccaagtggccaatgggatggagttcctggcttccaaaaactgtgtgcac
cgtgacctggctgccaggaacgtcctcatctgtgaggggaagctggtgaagatctgtgac
tttggcctggcgagggacatcatgagggattccaactatatctccaaaggcagcaccttc
ttgccccttaagtggatggctccagagagcatcttcaacaacctctacaccaccctgagt
gatgtgtggtcttttgggattcttctttgggagatattcactctaggagggactccatac
cctgaactgcctatgaatgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccacgcctctgatgaaatctacaacatcatgcagaagtgctgggaggagaag
tttgagatcaggccatccttctcgcagctggtggtgcttatgggaaacctcctggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccccgct
gttgtccgcacaagacccacgattcctgtgctgaacaacgcccggcttgctgccagctcc
cccaccagcagcatcctctacacagctgtgcaccagaacgggggcgagaatgattatatc
atccctcttcccgaccccaaacctgaggcaagctgtgacctccctcaggaggcctccatc
agccgggccagctctatgctgaacgaggccaacacatcatctacaatatcctgtgacacc
cctctgggcctccggcaggatgaggagcaggaatccgacccacagccaggctgccaggag
ccaaccactggactccaagaggtggaggagagtttcctgtag
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