Corvus brachyrhynchos (American crow): 103616596
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Entry
103616596 CDS
T08418
Symbol
SCN2A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbrc04040
]
103616596 (SCN2A)
Ion channels [BR:
cbrc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103616596 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Neur_chan_memb
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
103616596
NCBI-ProteinID:
XP_017591250
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSI
GENGTFINATMTTFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAGAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSIASMLTNTMEEL
EESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISSDCELPRWHMHDFFHFFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYVK
RKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVDIGKNLAYLKDGNGTTSGI
GSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDIGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVEEGKGKVWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFDIS
QINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVL
DQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQSED
MENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPHKDHP
GSSVKGDCGNASVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAYRR
HLLRLKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTPSTTSPPSYDSV
TKPDKDKYEKDKQKKKIKVKTAGKVKSNIECCL
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgaacagcgtatcaatgaagagaaagctaaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccgaagccaaacagtgacttggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtctgagcccttggaagac
ctggacccatattatatcaataaaaaaacttttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttctccgagacccatggaattggctagatttcactgtcatcaca
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagactattgtgggagcc
ctgattcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctactttcgaaacaactgttatttccatttttaatagctctata
ggtgaaaatggtacatttattaatgcaacaatgacaacatttaactgggatgagtacatc
gaagacaaaagtcatttctacttcttggaaggacaaaatgatgcactactgtgtggcaat
agctcagatgcaggtcaatgcccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacccttcgtgctgctgggaaaaca
tatatgatattttttgttttggtcattttcttgggttctttctacctgatcaacttgatc
ctggctgtggtcgccatggcctatgaggaacagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcggcggcagcagctggagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagagcaatctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgagtcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaggggaatagactgacatacgaaaagagattctcttccccgcaccagtccttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagccaggccagtaggtcatccagaacagtacctgcacttcca
gcaaatgggaagatgcacagcactgtggattgcaacggagtagtttctttagttggtggg
ccgccagctctgacatcgcctacgggacagcttctgccagagggcactactacagaaact
gacttaagaaagagacattctagttcttaccatgttcctatggactacctaacagaccct
agtgcaaggcaaagagcaatgagtatagccagcatgcttacaaacacaatggaagaactg
gaagaatccagacagaaatgcccaccatgttggtataaatttgctaacacttgcttgatt
tgggactgctgtactccctggctgaaagtcaaacatattgtaaatttgattgtgatggac
ccatttgttgatctggccattaccatctgcatcgtcctaaacaccctgttcatggccatg
gagcactacccaatgacagaacagtttagtggtgtgctttcagtaggaaaccttgtgttt
actggaattttcacagcagaaatgtttctcaagataattgccatggatccttattattat
ttccaagagggctggaatatttttgatggttttattgtgagtcttagtttaatggaactt
ggccttgcaaatgtagaaggattatctgtccttcgatcattccgattgcttcgagttttc
aaattggcaaaatcttggccaactctaaatatgctgattaagattattggcaactcagtg
ggggctctggggaatctgaccctggtgctggccatcattgtgttcattttcgctgtggtt
gggatgcagctgtttggcaaaagctacaaggaatgtgtctgcaagatctccagtgactgt
gaacttcctcgctggcacatgcacgactttttccattttttcctgattgtattccgagtg
ctgtgtggagaatggatagaaacgatgtgggactgcatggaggttgcaggccaaaccatg
tgccttacagtcttcatgatggtcatggtgattggaaacctagtggtactcaacctcttt
ttggccttgctgctgagctcatttagttcagacaaccttgctgctacagatgatgataat
gaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagattatgtgaag
agaaaagtgcgtgaattcattcaaaaagcctttgttagaaaacagaaagttttagatgaa
atcaaacctcttgaagacctaaacaataaaaaagacagctgtatttccaaccatacaata
gtagacataggtaaaaaccttgcctatctcaaagatgggaatggaactaccagtggcata
ggcagcagtgtggaaaaatatgttgttgatgaaagtgattatatgtcattcataaacaac
ccaagtctcaccgtgacagtgcccattgctgtcggagaatcagattttgaaaatttaaac
acagaggagttcagcagtgaatcagacctggaagaaagcaaagagaaattgaatgcatcc
agttcatcagaaggcagcacagttgatattggactacctccagaaggtgaacagccagaa
gcagaacctgaagaagttctggagccagaagcttgttttacagaagggtgtgtacggaga
ttcaaatgctgtcaagtcagtgtagaagaaggaaaggggaaagtctggtggaatcttagg
aaaacctgctataagattgttgaacacaactggtttgagaccttcatagtcttcatgatt
cttctcagcagcggtgctctggcatttgaagatatctacatagagcaacgtaaaactatc
aagaccatgctggaatatgctgacaaagttttcacctatatcttcattctggaaatgctt
ttaaaatgggtggcttatggctttcaaacctatttcactaatgcgtggtgctggctggac
ttcctgattgttgatgtctctttggttagcttaacagctaatgccttgggctactcagaa
cttggtgcgattaagtcccttaggacactaagagctttgagacctctaagagccttgtcg
cgatttgaagggatgagggtggtggtgaatgccctgttaggagcaattccatctattatg
aatgtgcttcttgtttgccttatattctggctgatctttagtatcatgggagtaaatcta
tttgctggaaagttttactactgtgttaacactacaaccgatgagagatttgatatcagc
caaatcaacaactttagtcaatgtgaggagctcatacaaaacaatgaaactgcccggtgg
aagaatgtgaaggttaactttgacaatgtaggccttggttacctttctctgctccaagtg
gctacgtttaaaggatggatggatatcatgtacgcagctgtggattctcgtaatgttttg
gatcagcctaagtatgaagataacctgtacatgtatctttactttgtcatctttatcatc
tttggatcattttttaccttgaacctttttattggtgtcatcatagacaatttcaaccag
cagaaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactac
aatgcaatgaaaaaactgggttcaaagaaaccacaaaagcctatacctcgaccagcaaac
aaattccaaggcatggtctttgattttgtaacaaaacaagcatttgatatcagtatcatg
atacttatctgccttaatatggtcacaatgatggtagaaacagatgatcagagtgaagac
atggaaaacattttatattggattaacctggtgtttatcgtacttttcactggagaattt
gtcctgaaattgatttcacttcgtcattactactttactataggttggaatatttttgat
tttgtggttgtcattctctccatagtaggtatgttcttagctgagatgattgagaagtac
ttcgtatcccccacactattcagagtcatccgacttgccagaatcggtcgaatcctgcgc
ctcattaagggcgctaagggaatccgcactctgctttttgctctgatgatgtctcttcct
gctttgttcaacattgggctgctgctcttcctggtcatgttcatctatgccatatttggc
atgtccaactttgcctatgtcaagagggaagttgggattgatgacatgttcaactttgaa
acgtttggcaacagcatgatctgcctgtttcagatcaccacatccgcgggctgggatggt
ttgctcgccccgatccttaacagtggggagccagactgtgacccccataaagatcatcca
gggagttctgtgaaaggggactgtgggaacgcgtctgttgggattttcttctttgtcagc
tacattatcatatcctttctggtagtggtgaacatgtacatcgctgtgattttggagaac
ttcagtgttgctactgaagaaagcgctgaacccttgagcgaggacgactttgagatgttc
tatgaagtctgggagaagtttgatcctgatgcaacacaattcatagagttcagtaaatta
tcagattttgcagcttcattagatccacctcttctcatagcaaaaccaaacaaagtccag
cttattgcaatggatctgcccatggtgagcggtgacagaattcactgccttgacatcttg
tttgctttcacaaagcgtgtattgggggaaagtggggagatggacgccctcagaatacag
atggaagatcggtttatggcagccaatccttctaaagtctcctatgaaccaattacaacc
acattgaaacgaaaacaggaggaggtgtctgctgtcatcattcagcgtgcttacagacgt
caccttttaaggctaaaagtcaaaaaagtatcatgtatatttagtcaggataaaggtaaa
gaggaagatgatctgcccatgaaagaagatatgattatggataaactcaatgagaactct
actccagaaaaaacagatatgaccccatccacaacctccccaccttcttatgacagcgta
acaaagccagacaaggataaatatgaaaaagacaagcagaaaaagaagataaaggtaaag
acagcagggaaagtaaaaagtaacatagaatgctgtttgtga
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integrated database retrieval system
