Corvus brachyrhynchos (American crow): 103616597
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Entry
103616597 CDS
T08418
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbrc04040
]
103616597
Ion channels [BR:
cbrc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103616597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
103616597
NCBI-ProteinID:
XP_008633026
LinkDB
All DBs
Position
Unknown
AA seq
2010 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQDHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINIISYFNSTM
NENGTFVNMTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRLTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGHAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMIPALPVNGKMHSTVDCNGVVSL
VGGPSALTSPTGQLIPEGTTTETEIRKRRLSSYQISMEMLEESAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
FVKKKIQEFIRKAFVRKQKSLEEIKALEELNNKKDSCISNHTAVEISKDLNYLKDGNGTT
SGVGTGSSVEKYVIDENDYMSFINNPGLTVTVPIALGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKGKT
WWNLRKTCYSIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDISDVNNYTQCAELIKSNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMIFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
HKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQ
RAYRRHLLRLKVKQVSSLYNRNKNKEGDGHIIKEIIINKLKGNSTPEKTDESSTTSPPSY
DSVTKPDKEKYEKDKAEKNYKGKDIRENKK
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccacctggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaaacgttctgcagaagaaaaggctaaaaagcccaagcaagac
catacagatgatgatgatgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtatctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaagcaatt
ttccgtttcagtgccacatctgccttgtatattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggattctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcatttta
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagactattgtgggagcc
ctgattcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaataaacattatttcctactttaacagcacaatg
aatgaaaatggtacatttgttaacatgacagtgagcacgtttaactggaaggattacatt
gaggatgaaactcatttttacatcttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcaatgcccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgacaccttcagttgggcttttttgtctctgtttcggcta
atgactcaggacttctgggaaaacctctatcagctgactcttcgtgctgctgggaagaca
tacatgatcttttttgttctggtgatttttctgggctctttctacctgatcaacctcatc
ctggctgtggtcgccatggcctatgaagagcagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcaacagatgctggaacaactaaagaagcaacaggaagaagct
cagacaacagcagcagtagcagcagcatcagttgcatcaagagatttcagtggtgtaggg
ggattaggagaactcttggaaagctcttcagaagcatcaaagctgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagaggac
aaaggagatatcgataagttccccaagtctgagtcagaagacagtatcagaaggaaaagt
ttccgcttctccactgaaggaagtcaactgacatatgaaaaaaggctcacttctcctcac
cagtctttgttaagcattcgtggttctctgttctcaccgaggcgcaacagcaaaaccagc
attttcagtttcagaggtcatgcaaaggatataggatctgaaaatgattttgctgatgat
gaacatagcactcttgaagacaatgagagcagaagagattctctctttgtcccaaatcga
catggagaaaggcgcaacagtaacattagtcaggcgagtgtgtcatctagaatgatacca
gcccttccagtaaatgggaagatgcacagcactgtggattgcaatggagtggtttccttg
gttggaggaccttcagctctaacttcacctactggtcagcttataccagagggcaccact
actgaaacagaaataaggaaaagaagactgagttcatatcaaatttccatggaaatgctg
gaagagtctgctgcaagacaaagagcaatgagcatagccagcatacttacaaatacaatg
gaagagcttgaagaatccagacagaaatgcccaccatgctggtacagatttgcaaatact
ttcttgatctgggattgctggagtccatggttaaaagtaaagcatgtcgtcaatttagtt
gtgatggatccatttgttgatcttgctataactatttgcattgttttaaacaccttgttt
atggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ctggtattcactgggatatttacagcagaaatggtactaaagattattgccatggaccct
tattattatttccaagaaggctggaatatttttgatggtattatcgttagccttagttta
atggagcttggtcttgcaaatgttgaaggattatctgttcttcggtcattcagattgctt
cgagttttcaaattggcaaaatcttggccaactttaaatatgctgattaagattattggc
aattcagtgggggctctggggaatctgaccctggtgctggccatcattgtgttcattttc
gctgtggttgggatgcagctgtttggcaaaagctacaaggaatgtgtctgcaagatctcc
agtgactgtgtgcttcctcgctggcacatgcacgactttttccactctttcctgattgta
ttccgagtgctgtgtggagaatggatagaaacgatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgattggaaacctagtggtattg
aacctatttctggccttgctgctgagctcatttagttcagacaaccttgctgctacagat
gatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagat
tttgttaaaaaaaagatacaggagttcatccgaaaagccttcgttagaaagcagaaatct
ttagaggaaatcaaagcacttgaagagctaaacaacaagaaagacagctgcatttccaat
catactgctgttgaaataagcaaagatctgaattatcttaaagacgggaatggaaccacc
agtggtgtaggcacaggcagcagtgtggaaaaatacgtaattgatgaaaatgattatatg
tcattcataaacaacccaggcctcactgtaacagtgcccattgcacttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagcgaatctgatatggaagaaagcaaacag
aaactaaatgcatcaagctcatcagaaggcagcactgttgatattgctcctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttaccgaa
ggttgtgtgcagaaatttccatgttgtcaagtaagtatagaggatggcaaaggaaaaact
tggtggaatcttagaaaaacctgctacagcatagttgaacacaactggtttgagactttc
attgtattcatgattctcgtcagcagtggagcactagcttttgaagacatatatattgaa
caacgcaaaactatcaagaccatgctggagtatgctgacaaagtttttacgtatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggacttcctgattgttgatgtctcattggttagtttaatagccaatgct
ctgggctattctgaacttggtgccattaaatcgctacggacattaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaacgcccttgtaggagca
atcccatctatcatgaatgtattgctggtatgtcttatattctggctaatcttcagcatc
atgggagtaaatctgtttgctggaaaattctatcactgtgtcaacaccacaactggtgag
atgtttgatatcagtgatgtcaacaattatactcagtgtgcagaactcataaaaagcaat
caaagtgcccgatggaagaatgtgaaagtcaacttcgacaatgtaggagctggatatctt
gctctgcttcaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcacgagatgtaaaagatcaacctaagtatgaggacaacttgtacatgtatctctatttt
gtcatctttatcatatttggatcattttttaccttgaaccttttcattggtgttattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatactataacgcaatgaaaaaactgggatccaaaaagccacagaaacctata
ccgaggccagtgaacaaattccaaggcatgatctttgattttgtaaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagat
gatcagagtaaagaaatggaaacaattttatcccggattaacttggtgttcattgtcctt
ttcactggagaatttgtcttgaaattaatttcacttcgccattactacttcactataggc
tggaatatttttgattttgtggttgtgattctctccatagtaggtatgttcttagctgag
atgattgagaagtacttcgtatcccccacactattcagagtcatccgacttgccagaatc
ggtcgaatcctgcgcctcattaagggcgctaagggaatccgcactctgctctttgctctg
atgatgtctcttcctgctttgttcaacattgggctgctgctcttcctggtcatgttcatc
tatgccatatttggcatgtccaactttgcctatgtcaagagggaagttgggattgatgac
atgttcaactttgaaacatttggcaacagcatgatctgcctgtttcagatcaccacatcc
gcgggctgggatggtttgctcgccccgatccttaacagtggggagccagactgtgacccc
cataaagatcatccagggagttctgtgaaaggtgactgtggcaacccttctgttgggatt
ttcttctttgtcagctacattatcatatcctttctggtagtggtgaacatgtacatcgct
gtgattttggagaacttcagtgttgctactgaagaaagcgctgaacccttgagcgaggac
gactttgagatgttctatgaagtctgggagaagtttgatcctgatgcaacacaattcata
gagttcagtaaattatcagattttgcagcttcattagatccacctcttctcatagcaaaa
ccaaacaaagtccagcttattgcaatggatctgcccatggtgagcggtgacagaattcac
tgccttgacatcttgtttgctttcacaaagcgtgtattgggggaaagtggggagatggac
gccctcagaatacagatggaagatcggtttatggcagccaatccttctaaagtctcctat
gaaccaattacaaccacattgaaacgaaaacaggaggaggtgtctgctgtcatcattcag
cgtgcttacagacgtcaccttttaaggctaaaagttaaacaagtgtctagtctatataat
agaaataaaaacaaagagggagatggacacattataaaagagataattattaataaacta
aaagggaactccactccagaaaaaacggatgagagttctacaacttccccaccctcttat
gacagtgtaacaaagccagacaaagaaaaatatgaaaaagataaagcagaaaagaactac
aaaggtaaagacatcagggaaaataaaaaataa
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integrated database retrieval system
