Corvus brachyrhynchos (American crow): 103618684
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Entry
103618684 CDS
T08418
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103618684 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103618684 (TRIP13)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
103618684 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_14
AAA_18
AAA_5
IstB_IS21
RuvB_N
AAA_25
AAA_24
AAA_28
NPHP3_N
NACHT
TsaE
ATPase_2
bpMoxR
Cytidylate_kin
RNA_helicase
AAA_30
AAA_33
DUF815
AAA_7
AAA_11
ABC_tran
AAA_17
TIP49
PduV-EutP
KAP_NTPase
Mg_chelatase
AAA_19
ATPase
Rad17
AAA_3
SLFN-g3_helicase
PhoH
NB-ARC
nSTAND6
nSTAND1
NTPase_1
Motif
Other DBs
NCBI-GeneID:
103618684
NCBI-ProteinID:
XP_008635335
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MDDAAGDLKRALPNVCDSVQIHVEVHQKSSSAAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDPFLNNNVQSVSIVDTELKLKDRQPIDLSKSSLSLHIFHLNEGGPTSENLEEENEDIT
AAHHWVLPAAEFHGLWESLIYDTEVKSNLLDYVTTTLLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELV
DDRDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLVLKEISRKSAGLGGRVLRKLPFLAHALYIQSPSVTMTTFLQALSLAVDK
QFEEKKNLADCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgccgctggagatttgaagcgagcgctcccaaacgtctgtgacagcgttcag
atccatgtggaagttcaccagaagtcgagcagtgcggccaagaaagaggatattaggatg
agtgtcttaaagctgttgaacagacacaacattgtgtttggtgattacaagtggacagag
ttcgacgaccctttccttaacaacaacgtgcagtctgtgtcgattgtggatacggagctg
aaactgaaggacagacagcctattgacctgagcaaaagcagtctttctcttcatattttt
catctgaatgaaggaggaccaacctctgaaaacctggaagaagagaatgaggatatcact
gcagctcaccactgggtgctaccagcagctgaattccacggcctttgggaaagtcttatc
tatgacactgaagtaaaatcaaacttactcgattatgtgacgacaacattattattttcc
gacaaaaatgttgacagtaacctgatatcgtggaacagagttgttttgctgcacggccct
cctggaactgggaaaacttctctctgtaaagcattggctcagaaactgacaattcgactg
tcatacaggtatagatatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagcttgtaaccaagatgttccagaagatccaagagttagtt
gatgacagagatgctcttgtatttgtactgattgatgaggtggaaagcctcacagcagcc
cgcagtgccttcaaggcaggcacagagccttcagatgctattcgtgtggtgaatgctgta
ctgacacaaatagaccagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacagagaaaattgacatggcctttgtagacagggctgacataaaacaatacattgga
cctccatcgactgcagcaatatttagaatatatctttcttgcctagaagaactgatgaag
tgtcaaataatatatcctcgacagcagcttctgacactcagagagctcgagatgattggc
ttcatagaaaataatgtgtcaaagttaagccttgtactaaaagaaatctcaagaaaaagt
gcaggtcttggtggccgggtcctgagaaagcttcctttcctagcacatgcactttatatt
caatcccccagtgttacaatgacaacttttcttcaggccctttcacttgcagtagacaaa
caattcgaagaaaaaaagaatcttgcagactgtgtgtga
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