Corvus brachyrhynchos (American crow): 103621354
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Entry
103621354 CDS
T08418
Symbol
ACAN
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein
KO
K06792
aggrecan 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cbrc00535
]
103621354 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103621354 (ACAN)
04091 Lectins [BR:
cbrc04091
]
103621354 (ACAN)
Proteoglycans [BR:
cbrc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
103621354 (ACAN)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
103621354 (ACAN)
Lectins [BR:
cbrc04091
]
C-Type lectins
Lecticans
103621354 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
CTD
V-set
UL45
Motif
Other DBs
NCBI-GeneID:
103621354
NCBI-ProteinID:
XP_017598198
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MTTLLLVFVCLQVITAADSVELSDSSDGLEVKIPEQSPLRVTLGSSLNIPCYFNIPEEQD
TSVMLTPRIKWSKLSNGTEVVLLVATGGKIRLNSEYREAISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDTIEVLVKGIVFHYRAISTRYTLSFEKAKQACVQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATAPEKFTFQEAFEKCRSLGARLATTGELYLAWKDGMDMCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLYINQTGYPHPDSRYDAICYSGDDIESLVPGQFID
EIGSELGSAFTVQTVTQTEVELPLSRNATEEEARGSIATLEPIEITPTATRLYEGFTALP
DLFTTAVTVETAATEEENVTREDVTVVWTVPEEATTIDLGTAITTVALGTAGTTETAEVS
SVEEFLGVTATPGLESASASTVEDQLVRVTAAPGAGHLPEQPISPTGVVFHYRAATSRYA
FSFVQAQKACLENSAVIATPQQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRNNCVGDKE
NTPGVRSYGMRPASETYDVYCYIDRLKGDVFFATQPEQFTFQEAQQYCESQNATLASVGQ
LHAAWKQGLDRCYAGWLADGSLRXPLVSPRHALXLGVRTLYQHHNQTGFPDPLSRHHAFC
FRAVPPVEEEGVTPFFEDVLATQVIPGVEGVPSGEEATVEMESATQPENQTAWGTEVFPT
DMSLLSVSPSAFPPATIVPEETSTNGSISEVSGEVIESGEHQVSGESSASGWVPAVPDTS
GEPTSGVFELSGEHSGVGESGLPSVDLHASGFPPEESGLPSGDLSGVPSGIVDISGLPSA
EEEISVSISRIPEISGMPSEVESSGLPFGVSGEISGTELVSGVSSGEESGLASGFPTISL
VDTTLVEVVTAVPERREEGKGSIGVSGEGDLSGLPSSEWDSSGGIQGLPSGAEPSGEPSG
VPELSGLPSVGSELSELPSGLDASGEPSGTHETSGLVDLSGLPSGTDGSSEASGITFVDA
TLQEVTTTPPIIGAEAKETLETSGLPSGGEDASGTVSGSLDISGEPSGQVDFGGSVSGVL
EMSGYPSGVTDSSGDVSGVDVTSGLLSGEESGLTSGFPTVSLVDTTLVEVVTQTSVAQEV
GEGPSGMIEISGFTSGDRGLSGEGSGAVEFSGFPSGAGDLSGEPSGVPYISGDFSGATDL
SGQSSAVTDISGEASGLPGVTLVTSDLVEVVTRPTVSXXXXXXXXXXXXXXXSGKASASG
ELSGETSALPEGALETSTAYEISGETSAFPETGVETSTIHEISGETSAFPEFNTETSTIQ
EISGETSAFPEIVTETSTSQEARGETSGYPEIIIEASTGQEVSGETSAFPESSTETSTIQ
EISGETSAFPEIRIETFTSQDISGETSAFPEIRIETFTSQEARGEISGYPEISIETSTVH
ETSGETSAFPEISIETSTVHEISGESSAFPEIRIETYTNQEARGETSAYPEISIETSTVH
ETSGETSAFPEISIETSTVHEISGEMSSFPEISIETSTVHETSGEIPVFPEIRIETSTGE
EVRGETSAFPEISIETSTVHDISGETSAFPEFGIETPTSQEARGETSAYPEIFIETSTVQ
EVSGETSAFPEISIGTTTSQEARGETFPEISIEASTVPETSGEASTMPAANIKTAATSLA
SGEPFGTPEEKEVPDATSGAVTHSITGFSGEASVPDIVIGTRTPDVEPAQGLRNLEEAQL
EIEPSPPAVSGQETETAVAPDNPHLLATTTAALPQVSQEAIDALGPTTEDLANCEEGWTK
FQGHCYRHFEERETWMDAETRCRQHQAHLSSIITPEEQEFVNSHAQDYQWIGLSDRAVEN
DFRWSDGHSLQYENWRPNQPDNFFSAGEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVA
CGNPPAVENARTFGRKKERYEINSLVRYQCDQGYIQRHVPTIRCQPNGQWEEPRISCLNP
SSYQSRLYKRSPRSRSKPSGSAVHRPTH
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcaagtcatcactgcagccgactctgtg
gagctctcagacagtagtgatggcctggaagtcaagatacctgagcagtctcccctgcgt
gttaccctgggaagctccctgaacatcccgtgttacttcaacatcccagaagagcaggac
accagtgtcatgctgaccccacggatcaaatggagcaagctctccaacggcaccgaagtt
gtcctgctggtggccaccggtgggaaaatccggctcaacagcgagtacagggaggcgatc
tccttgcccaactaccccgccatccccaccgatgccacgctggagatcaaggcgctgaga
tccaaccacacgggcatttatcgctgtgaagtcatgtacgggattgaggacagacaagac
acgatagaggtcctagtgaaaggcatcgtattccactacagagcaatctccacaaggtac
accctgagcttcgagaaggcaaagcaggcctgtgtccagaacagcgctgtcatcgctacc
cccgagcagctgcaggctgcctacgaggatgggtacgagcagtgtgatgctggctggctg
gctgatcagactgtcaggtaccccatccactggccccgggagcgctgctatggtgacaag
gacgaatttccaggagtgaggacctacggtgtccgtgagccagatgaaacctatgatgtt
tactgctatgcagagcaaatgcaaggcaaagtcttctatgccactgccccggagaagttc
accttccaagaagctttcgagaaatgccgcagcttgggagcgcgcttggccaccacggga
gagctgtacctggcctggaaggacggcatggacatgtgcagcgcgggctggctggccgac
cgcagcgtccgctaccccatctccagagcacggcccaactgcgggggcaacctggtgggc
gtgaggacggtgtacctgtacatcaaccagacggggtacccgcaccccgactcccgctac
gatgccatctgctacagcggggatgacattgagagcctggtcccagggcagttcatcgac
gagatagggagcgagctgggcagcgctttcactgtccagactgtcacccagactgaggtg
gagctgcctctgtcacgcaatgccacggaggaggaggcccgcggcagcattgccaccctg
gagcccattgagatcacccccaccgccaccaggctgtatgagggcttcactgccctgccc
gatctcttcaccaccgctgtcacagtagagacagctgccacagaggaggaaaatgtgacc
agggaggatgtcacagtggtctggactgtccctgaagaggccaccaccatagacttaggc
actgccatcaccactgtagccttaggcactgctggtaccaccgaaacagcagaggtgagc
tcagtggaagagttcctgggggtgactgccacaccaggactggagtctgcctcggcatcc
acagtggaagatcaacttgtgcgagtgacagctgcccccggtgctggtcacctccctgag
cagcccatctcccccacaggtgtggtgtttcactaccgtgcagccaccagcagatatgcc
ttctccttcgtccaagcccagaaggcctgcctggagaacagtgccgtgattgccaccccc
cagcagctccaggctgcctacgaggctggcttcgaccagtgtgatgctggctggctgcgg
gaccagacagtcaggtatcctattgtgaatccccgaaataactgcgtgggagacaaagag
aacactccaggtgtgcggtcatacggcatgcgcccagcttcggagacctacgacgtgtac
tgctacatcgacaggctcaagggcgatgtgttcttcgcaactcagccagagcagttcacc
ttccaagaagcccagcagtactgtgagagccagaacgccacgctggcctccgttgggcag
ctccacgccgcctggaagcagggcctggacaggtgctacgcgggctggttggccgacggc
agcctgcgctaacccctcgtgagcccccggcacgcccttnttttgggcgtcaggaccctg
taccagcaccacaaccagacgggcttccccgacccgctgtcccggcaccacgccttctgc
ttcagagctgtgcctcccgtggaggaggagggagtcaccccgttctttgaagatgtgctg
gcaacacaagtgatccctggagtggagggggtgccctctggggaggaggcgaccgtggag
atggagtctgccactcaacctgagaatcagacagcctggggaacagaggtcttcccaact
gatatgtcactgctctcagtgagtccatctgcttttcctccagctaccatagtaccagag
gaaacaagtaccaatggttccatcagtgaagtgtcaggggaggtgattgaatctggagag
catcaagtcagtggtgaatcttcagcatccgggtgggtacctgcagtcccagatacaagc
ggagaaccaacttctggcgtttttgaacttagcggagagcactcgggggttggagagagc
ggattaccatcagtagacctgcatgccagtggcttcccacctgaagagagtgggctgccc
tcaggagacctgagtggtgtgccttcgggcattgttgatatcagtggcctgccttctgca
gaggaggagatatcggtgtctatttcaaggataccagaaattagtgggatgccatctgaa
gtggaaagcagcgggctgccttttggagtgagtggagaaatctctggcactgagctagtc
agtggcgtgtcatctggagaggaaagtgggctcgcctctggttttcctaccatctctctt
gtggataccacattagtggaagttgtaacagcagtgccagaacggcgagaggagggaaaa
gggtccatcggagtcagcggtgaaggagatctgtcagggctcccatcctctgaatgggac
agcagtggtggaatccaaggcttaccctcaggagctgagcccagcggggagccctctggg
gtacccgagctcagcgggctgccgtcggtagggtctgagctgagcgagttgccctcagga
ctggatgccagtggagaaccatctggaacacatgagaccagtggcctggtggacctaagt
ggccttccctctggtactgatggaagcagcgaagcctctggcattacctttgtagatgcc
actctgcaggaagtgacaacaaccccaccaattataggagccgaagcaaaagagactttg
gaaacaagtggattgccttcaggaggtgaagatgcgtcaggcacggtatctgggagctta
gacatcagtggtgagccttctgggcaggtagactttggtgggagtgtttctggagtgctg
gagatgagcggatatccgagtggagtgacggacagcagtggagacgtctctggagttgat
gtcaccagtggtctgctgtctggagaggaaagtggactcacctctggttttcccactgtc
tctcttgtggataccactttggtggaagttgtaacacagacatcagtggcgcaagaagtg
ggagaaggaccgtctgggatgatagaaatcagtggatttacttctggagacagaggactc
tctggagaggggtctggagctgtggagtttagtgggtttccttcaggggcaggagacttg
agtggagagccatctggagtcccatacatcagtggagacttttctggagccacagatcta
agtggacagtcttcagcagtgactgatattagtggggaggcctcagggctcccaggagtc
actttagtcacttctgatttagtagaagtggtgacaagaccaacagtgtcnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcggtaaagcctctgcgtctggc
gaactaagtggggaaacatctgctctgccagaaggtgctctagaaacatcaacagcttat
gaaatcagtggggaaacatctgcatttcctgaaactggtgtagaaacatccacgattcat
gaaatcagtggggagacatctgcatttcccgaatttaacacagaaacatcaacaattcaa
gaaatcagtggggaaacctctgcatttcctgaaattgtcacagaaacatccacaagtcag
gaagccagaggtgaaacatctggctatcctgaaattatcatagaagcatccacaggtcaa
gaagtaagtggggaaacctctgcgtttcctgaaagcagcactgaaacatccacaatacaa
gaaatcagtggggaaacatctgcatttcctgaaattagaatagaaaccttcacaagtcaa
gacatcagtggggaaacgtctgcttttcctgaaattagaatagaaactttcacaagccaa
gaggccaggggtgaaatatctgggtatcctgaaatcagcatagaaacttcgacggtccac
gaaaccagtggagaaacatctgcctttcctgaaatcagcatagaaacttccacagtgcat
gaaattagtggagaaagttctgcctttcctgaaattagaatagaaacatacacaaatcaa
gaagccaggggtgaaacatctgcctacccagaaattagcatagaaacttcaacagtccat
gaaaccagtggggaaacttctgcctttcctgaaatcagcatagaaacttcgacggtccat
gaaatcagtggggaaatgtcctcctttcctgaaattagcatagaaacttcgacagtccat
gaaaccagtggtgaaatacctgtatttcctgaaattagaatagaaacatccacaggtgaa
gaagttcgaggcgaaacatctgcatttcctgagattagcatagaaacttctacagtccat
gacatcagtggggagacatctgcattccctgagtttggcatagagacaccaacaagtcaa
gaagccaggggtgaaacatctgcctatcctgaaattttcatagaaacatccacagttcaa
gaagtcagtggggaaacttctgcgtttcctgaaatcagcataggaacaaccacaagtcaa
gaagcccgaggtgaaacatttcctgagatcagcatagaagcatccacagtccctgaaacc
agtggggaagcatctacaatgcctgctgctaacattaaaacagctgccacatctttggcc
agtggggagccctttggtactcctgaggagaaggaggttcctgacgcaacatctggagct
gtgacacactcgatcacaggcttttcaggggaagcctctgtcccagacattgtaattggt
accaggactccagatgttgaaccagcacagggactcaggaaccttgaagaggctcagctt
gaaatagagccttcccctcctgcggtgtcaggacaagagacagagacagctgttgctcca
gacaatccccatctgctggccaccaccactgctgccctgcctcaagtctcacaagaagca
attgacgcattaggacccactacagaagacttggcaaactgcgaggaaggctggaccaag
ttccagggccactgctaccggcactttgaagagagggagacttggatggatgcagagacc
agatgccgacaacatcaagctcacctgagcagtatcatcaccccagaggaacaagaattt
gtgaacagtcacgcacaggactaccagtggattggtctgagtgacagagctgtggagaat
gacttccgctggtccgatgggcactccctgcaatatgagaactggcggcccaaccaaccc
gataacttcttttcggcgggcgaggactgcgttgtgatgatctggcacgagaaaggcgaa
tggaacgacgttccctgcaactatcacctccctttcacctgcaagaaaggaacagtggcc
tgcgggaacccccctgcggtggagaatgccaggaccttcggtcggaagaaggagcgctac
gaaataaactccctggtgcggtaccagtgcgaccaaggctacatccaacgccacgtgccc
acgatccggtgccagcccaatgggcagtgggaggagccgcggatatcctgcctaaacccc
tccagctaccagagcaggctatacaagaggagccccaggagccggtcgaaacccagcggc
agcgccgtgcacagacccacccattag
DBGET
integrated database retrieval system
