KEGG   Corvus brachyrhynchos (American crow): 103623814
Entry
103623814         CDS       T08418                                 
Symbol
SF3A1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103623814 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbrc03041]
    103623814 (SF3A1)
Spliceosome [BR:cbrc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103623814 (SF3A1)
 Complex B
    103623814 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    103623814 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 103623814
NCBI-ProteinID: XP_017601976
LinkDB
Position
Unknown
AA seq 836 aa
MVRAGPGRGDTPGNNGATRPGTDGVTEPGMEGTPYWDRVLERDQHGTPRARRSPGVLGNQ
RESEGIGGIGGNRREEAPGPVQPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQS
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESIEETAIGKKIGEEEIQKPE
EKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPSKPNEIPQPP
PPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTSVVRLPPGSVIATPM
PPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPSPAPMPPVHPPPPME
DEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQVLVFTLPLSDQV
SVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHLALKERGGRKK
NT seq 2511 nt   +upstreamnt  +downstreamnt
atggtgcgggccgggccgggccggggggacacgcctgggaacaacggggccaccaggcca
gggaccgatggggtcaccgagcctgggatggagggaacgccctactgggacagggtgctg
gagagggaccagcacggtaccccccgggcccgacggtccccaggagtgctggggaaccag
agggaatcggaggggatcggaggaatcggcgggaaccgcagggaggaggcgccgggccca
gtacagccagaagaagagcctaaagaggaagcagcaccagccaagcctgtggtgggaatt
atttaccctcctccagaggtcaggaatattgtggacaagactgccagctttgtagccaga
aatggtccagaatttgaagccagaattcgtcagaacgaaataaataaccccaagttcaac
ttcttgaaccccaacgacccttaccatgcctactaccggcacaaggtcagcgagttcaag
gagggcaaagcccaggagccctcggctgccatccccaaggtcatgcagcagcagcagagt
gcccagcagcagctcccacagaaggtgcaggcccaggtgatccaggagacggtggtgcca
aaggagcctccgcccgagttcgagttcatcgcggaccctccatccatctcggccttcgac
ctggacgtggtgaagctcacggcgcagtttgtggcgcggaacgggaggcagttcctcacc
cagctcatgcagaaggagcagaggaactaccagtttgatttccttcgcccccagcacagc
ctcttcaactacttcaccaagctggtggagcagtacacaaagatcttgatcccgccgaag
ggcttgctcctcaagctcaagaaggaggctgaaaatcccaaggaagtcttggatcaggtc
tattacagagtggagtgggccaagttccaggagcgagagagaaagaaggaggaggaagag
aaggagaaggagcgtgttgcttatgcccagattgactggcatgactttgtggttgtggaa
acagttgacttccagcccaacgagcaagggaatttccctcctcccaccactccagaagag
ctgggagctcgaatcctgatccaggagcgttatgagaaatttggggaaagtgaggaggtg
gagatggaggtggaatcagatgaggaagatgaaaagcaagagaaaacagatgagcctcca
gcccagctggatcaggacacacaagtgcaggatatggatgaggggtcagatgatgaagat
gaaggtcagaaggttcctcctcctccagaaaccccgatgccacccccactccctcccaca
ccagatcaggtcattgtgcggaaagattacgatcccaaagcctcaaaaccgttaccaccc
gccccggctccagatgagtacctggtgtctcccatcactggagagaagattcctgccagt
aaaatgcaggaacacatgaggattgggctcctggatccacggtggctggagcagcgggat
cgatccatccgggagaagcagagtgatgacgaggtctatgccccaggtttggatattgag
agcattgaagagactgccattggtaaaaagattggtgaagaggagatccagaaaccagag
gaaaaggtgacctgggatggccactcgggcagcatggcccgcacacagcaggctgctcag
gccaatatcactctgcaagagcaaattgaagccatccacaaggccaagggactggtgcca
gaggatgacagcaaggagaagattgggcccagcaaacccaacgagataccccagccaccc
cctccttcctcagcctccaacccccctgccagcgcccagcccatcacatctgtacctcgt
ccacccaccatgcctcctcccgtccgtgccgccgtggtttctgcagttccagtcatgcct
cgtccccccatgacttccgtggtccggctgcctccggggtccgtcatagccacccccatg
cctcccataatccacaccccacggatcaacgtggtgcccatgcccccctctgctcccccc
atcatgagcccccgcccgccccccatgatagtccccacagcctttgtccctgcgcctccc
gtggctccggtcccgtccccagcgccgatgcctcccgttcaccccccaccccccatggag
gatgagccagtctccaagaaactgaagagtgaggatagcctgattccagaggaggagttt
ctgcgtaggaacaagggcccagtcacggtcaaagtccaagttcccaacatgcaggacaag
acagaatggaagctgaatggccaagtgctggtgttcaccctgcccctctcagaccaggtg
tctgttatcaaggttaagatccacgaggccacagggatgccagctgggaagcagaagctg
cagtacgagggcatcttcatcaaggattccaactccctggcttattacaacatgacgagt
ggctctctgattcacctggcactcaaagagagaggaggcaggaagaaatag

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