Culicoides brevitarsis: 134828063
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Entry
134828063 CDS
T10947
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134828063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134828063
Enzymes [BR:
cbri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134828063
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
134828063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
134828063
NCBI-ProteinID:
XP_063697084
LinkDB
All DBs
Position
1:complement(17437517..17444138)
Genome browser
AA seq
1664 aa
AA seq
DB search
MTVKHGIHLDPSTLKFSIFSSDDIRKLSVTKITTGQAFDEIGNPLTGGLYDNALGPCTNR
DICKTCFKDYASCTGHFGHIELCLPVYNPFFVKMAYSILRMSCLSCFKLQLPDITKSVTE
LQLELVDAGYIIEAEELEQYKSENVNDGEVKIKLENGLEVPKKVAEYQELLMREPFNQYG
NTKSTESIRNAILNNTMANCVTKTCIHCKQQMKRVKFSYKRLVFGLTKGDMKVFYGDEED
EKADKIKATNRNIFADECRQFLRKLYENDGKFLRLLFPVLKNVSQSGKCPLDALFMDILP
VTPSVVRPCNKLRGEILEHPQTTVYKEILRANNLLRSVIAVMKSNSKEDSMVISKDTQSI
YDLAKGNSADEKLYNAWNHLQAQVDLTLDVDPRAPVSGQGLKQIIEKKEGLIRMHMMGKR
VNYAARTVITPDPNIGVDEIGIPEAFALKLTYPTPVTPWNIQYLRKIVTNGPNVHPGACF
IENEIGQKIMISPTNETQRETLAKTLLTPTESRQGVKIVHRHLHNGDVLLLNRQPTLHKP
SIMAHKARILKGEKTFRLHYSNCKSYNADFDGDEMNAHFAQNELARSEAYNLVNVANQYL
VPKDGTPLGGLIQDHIISGVKLMLRGKFFNKHDYQQYVFQGLSKKSGHIKLLPPTIWKPI
PLWSGKQVVSTIIRNLIPEDVPPINLTATAKISAKAWQSQESREWAAGGSPLEGNSMSEA
EVIIRHGELLCGILDKNHYGATPYGLVHSMYELYGGDVSSNVLSAFSKLFTNYLQREGFT
LGVKDIIVLEKADKKRAKIIKKCRKSGRIAALGALELDLDTPDEVMIEKMDEAYTNNPKF
RTIIDRKYKQVLDSFTNDMNKTCIPTGLVSKFPENNLQLMVQSGAKGSTVNTMQISALLG
QIELEGKRPPLMISRKSLPSFPSFETSPRSGGFIDGRFLSGIRPQEFFFHCMAGREGLID
TAVKTSRSGYLQRCLIKHLEGLNVNYDMTVRDSDNSVVQFMYGEDGMDISKAQFFKTKTL
EFLNDNRDAIVNEELLKKLKNDEVIDEKINKHKKKLRQWIKKNGSALAKHRISAFKNYSE
EVAKEMDIKNPNKIKEGRSRLAGKIVESWQNADQDIITQYIKKSLRCPDPTISKFSPDNH
FTAISEYLESLISSFAKTHNDKDEQSAFSDMLYVKGITSLAAPGEPVGLLAAQSIGEPST
QMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMDIPFLKIEDQEKISEKLRIG
LNKVTVADVLETVNVKSKLVYFPQRGREYVLRFQFLPRDGYKNEFCVKPKQIIKHMSKNF
FKQMFRLIIQAAKEKNTIIDIETESKKKGKESTEEAGGDADTQGPNISVRPTRKDDSSDD
DEPMGDDADATDERKRAKQADERDYDEPEDPEEIQDAEVEEEDMIEEVPIDPLEEQQEME
AETADVVRSHEFAEDYTFDKDRHLWCQIRFCLPMKYKTIDLTNLLRNLAKKSIIWEVSKI
NRAITYMANDRLTLKTDGINIQSMFKYDTVLDLNKLYTNDIHAVANTYGIEAAARVIVKE
VQNVFKVYGITVDPRHLLLIADYMTFDGTFQPLSRKGMEASASPLQQMSFESSLVFLKSA
TIQGRADNLASPSSRLMVGQPCKSGTGICTLVNNNDYILKSLKK
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaacatggaatccatctggatccctcgacactcaaattttccatcttcagt
tctgacgacatccgaaaattgagtgtgacaaaaatcaccaccggacaggccttcgatgaa
attggaaatcctctcacgggtggattatacgacaacgccttaggcccatgcacaaatcga
gacatttgcaaaacttgcttcaaagattatgcttcgtgcacgggtcactttgggcacatt
gagttgtgtttgcccgtgtacaatccgttcttcgtgaaaatggcttacagtatcctgcgg
atgagttgtttgtcgtgtttcaagctacaattgcccgacattaccaaaagtgtgacggaa
ttgcagttggaactcgtcgatgccggttacattatcgaagcggaggagctggagcagtac
aagagcgaaaacgtgaacgatggcgaggtcaaaataaaactcgaaaatggtctggaagtg
ccaaagaaagttgccgagtatcaagaattgcttatgcgagaaccgtttaatcaatatggc
aacacaaaaagtacggaatcgatccgaaatgccattcttaacaacacaatggcgaattgc
gtgacgaaaacttgcattcactgcaagcaacaaatgaagagagtcaagttttcgtacaaa
agactcgtttttgggttgaccaaaggcgacatgaaggtcttttatggcgatgaagaagat
gaaaaagctgacaagataaaagcaacaaatcgtaacattttcgccgatgaatgtcgtcag
ttcttgcgaaaattgtacgaaaatgacggaaaatttcttcgtttgctatttccggtgcta
aaaaatgtcagtcaatccggaaaatgtcccttagacgcactgtttatggatattttacct
gttacgccttcagttgtgagaccatgcaacaaattacgcggtgaaattctggaacatcct
caaacaacggtctacaaagaaattctgcgtgccaataatctccttcgatccgtcattgcc
gtgatgaaaagtaacagcaaagaagattccatggtaatttcgaaagacacccaatcgatt
tatgacttggccaagggaaattctgccgatgaaaagttgtacaacgcttggaatcatctt
caagcgcaagttgacttaacgctcgatgttgatccgcgtgctccggtctctggacaggga
ttgaagcaaattatcgagaagaaagaaggtctcattcgcatgcacatgatgggaaaacgt
gtaaattatgccgctcgtaccgttattacgcccgatccgaatatcggagttgatgagatt
gggattccggaggcttttgcactgaaattgacctatccgacacctgttacgccatggaat
attcaatatttgcggaaaattgtcacgaatggaccgaatgttcatccaggtgcttgtttc
atcgaaaacgagatcggccagaagatcatgatttccccaacgaacgaaacgcaacgtgaa
acactcgccaaaacccttcttactccaaccgaaagtcgtcaaggtgtcaaaatcgtgcat
cgtcacttgcataacggcgatgttttgctgctgaatcgtcaaccgacgctccacaagccc
agtataatggctcacaaagctcgtatcctcaagggcgagaagacttttcgtttgcactac
tccaactgcaaatcctacaacgctgatttcgatggtgacgagatgaatgcgcatttcgca
caaaatgaactcgcccgcagcgaagcctacaacttggtaaatgtcgcgaatcaatatttg
gtaccgaaagacggaactccccttggcggcttgattcaggatcacatcatttccggtgtg
aaactcatgttacgcggaaaattctttaacaagcacgactaccaacagtacgttttccaa
ggcttaagcaagaaatccgggcatatcaagttacttccgccaacgatttggaagccgatt
ccactttggagtggcaaacaagttgtttcaacgatcatccggaatttaattcccgaagac
gtgccaccgataaatttaacggcaacggcgaaaattagtgcaaaagcgtggcagagtcaa
gaatcgcgtgaatgggctgctggcggctcgcctttggaaggaaattcaatgtctgaagcg
gaagtcattattcgtcacggtgaacttttgtgtggaattttggataaaaatcattatgga
gcaacgccttacggtttggtgcattcaatgtacgaattatatggcggcgatgtcagttcc
aacgttttgagtgccttttcgaagctttttacgaactatttgcaacgcgaagggttcact
ttgggtgttaaggacatcattgtgttggagaaagcggataagaaacgtgcgaaaatcatc
aagaaatgtcgaaaatccggtagaattgctgcgttgggggcactcgaactcgacttggat
acgcctgacgaagtgatgatcgaaaaaatggacgaagcgtacacaaataatccgaaattt
cgcacaattatcgatcggaagtacaaacaagttttggattcgttcacgaatgacatgaac
aagacatgcatcccgactggtttggtgagcaaattcccggaaaataatcttcagttgatg
gtgcagtcaggagccaagggttcaactgtcaatacgatgcaaatttcggcgttacttgga
caaatcgagttggaaggaaaacgtcctccattgatgatttcacgaaaatctcttccaagt
ttcccgagttttgagacttcgccacgttccggaggtttcattgacggtagatttttgtct
ggaattcgcccgcaagaatttttcttccattgtatggcagggcgtgaaggtctgatcgat
acagctgtcaaaacaagtcgttccggatatcttcaacggtgtctcatcaaacatttggaa
ggcttgaatgttaattatgacatgacggttcgcgattctgacaacagtgtcgttcaattt
atgtatggcgaggatggaatggacatcagtaaagctcaattctttaagacgaagacattg
gagttcttaaatgacaaccgagatgcaattgtgaacgaagaattgttgaaaaaattgaag
aatgatgaagttattgatgaaaaaattaataaacataagaagaagttgcgacaatggata
aagaaaaatggatcagctttggcaaaacatcgaattagtgcgttcaaaaattattctgaa
gaggttgctaaggaaatggatatcaaaaatcccaataaaatcaaagaaggtcgttcccgc
ctcgcaggaaaaatagtcgaatcctggcaaaacgctgaccaagacatcatcacgcaatac
atcaagaaaagccttcgttgtcctgatccgacaatcagcaaattcagtcccgacaatcat
tttactgcaatttctgaatatttggagtctctcatcagctctttcgccaaaacgcacaat
gacaaggacgagcaaagtgcttttagtgacatgttgtacgtaaagggcatcacatcgctc
gcagctcctggagaacctgttggacttcttgcagcacaatccattggagaaccatcgacg
cagatgacactgaatactttccatttcgccggtcgtggtgagatgaacgtcactctcggt
atccctcgtttgcgcgaaattctcatgatggcatcgaaaaacatcaaaacaccctcgatg
gatattccttttttgaaaattgaagatcaggaaaagatttccgagaaactgcggatcgga
ttgaacaaagttacggtcgctgatgtgctggaaactgtaaatgtcaaaagcaagttggtt
tatttcccacaacgaggacgagaatatgtcctccggtttcaatttttacctcgcgatggc
tataaaaacgaattttgtgtcaagccgaagcaaataatcaaacacatgtcgaagaatttc
ttcaaacaaatgtttagattaattattcaagcggcaaaagagaaaaatacgatcattgac
atcgaaactgagagtaaaaagaagggaaaagaaagcacagaagaggcaggaggtgatgcc
gacacccaaggaccaaatatttccgttcgcccaacgcgaaaagacgacagttccgacgat
gacgaaccaatgggcgacgatgctgatgccacggacgaacgaaaacgcgcgaaacaagct
gacgaacgggattacgacgagcctgaagaccctgaagagatccaggatgccgaagtagag
gaagaagacatgatcgaagaagtccccatcgatccgttggaagaacagcaagaaatggaa
gcagaaactgcagatgttgtacgaagtcacgagtttgccgaagactatactttcgacaaa
gatcgtcatttgtggtgccaaattcgtttctgtctgccgatgaaatacaaaacgatcgat
ttgacgaatctcttgcgaaatctcgccaaaaaatcgattatttgggaagtttcgaagatt
aatcgtgccatcacgtatatggcgaacgatcgtttgaccctcaaaacggatggcattaac
atccagtccatgttcaagtatgacacggtgctcgatttgaacaaattatacacgaacgac
atccatgcggtggcaaatacgtatggaattgaggcagctgccagagttattgtgaaagaa
gttcagaatgtctttaaagtttatggcattacggtagatccgcgacatttattgctgatt
gccgattacatgaccttcgatggcaccttccaaccactgagtcgcaagggaatggaggca
tctgcgtcgccgttgcagcaaatgtcgttcgagtcatcgttagtatttttgaaatcagcg
acgattcagggaagagctgataacctggcgtcgccatcgagtcgcttgatggtaggacaa
ccatgcaaaagtggcacgggcatttgtacgttggtgaataacaacgattatattctaaaa
agtttgaaaaaataa
DBGET
integrated database retrieval system
