Clostridium botulinum E3: CLH_1691
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Entry
CLH_1691 CDS
T00767
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
cbt
Clostridium botulinum E3
Pathway
cbt02024
Quorum sensing
cbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLH_1691 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLH_1691 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbt03019
]
CLH_1691 (hfq)
03036 Chromosome and associated proteins [BR:
cbt03036
]
CLH_1691 (hfq)
Messenger RNA biogenesis [BR:
cbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLH_1691 (hfq)
Chromosome and associated proteins [BR:
cbt03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CLH_1691 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
ACD53932
UniProt:
B2V268
LinkDB
All DBs
Position
1841675..1841908
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AA seq
77 aa
AA seq
DB search
MNKQQNNLQDIFLNSARKNKIPVTVYLSTGFKLNGIVKGFDSFTVILDSEGKQMLIYKHA
ITTVTPEKPILFVDNES
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaacaaaataatctacaagatatatttttaaacagtgcaagaaaaaataaa
atacctgtaacagtatatctttcaactggttttaaattaaatggaattgtaaagggcttt
gacagttttactgttattttagattctgagggtaaacaaatgcttatatataaacatgca
ataaccactgtaactccagagaaaccaattttatttgtagataatgaaagctaa
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