KEGG   Clostridium botulinum E3: CLH_1691
Entry
CLH_1691          CDS       T00767                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cbt  Clostridium botulinum E3
Pathway
cbt02024  Quorum sensing
cbt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLH_1691 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CLH_1691 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbt03019]
    CLH_1691 (hfq)
   03036 Chromosome and associated proteins [BR:cbt03036]
    CLH_1691 (hfq)
Messenger RNA biogenesis [BR:cbt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CLH_1691 (hfq)
Chromosome and associated proteins [BR:cbt03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CLH_1691 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: ACD53932
UniProt: B2V268
LinkDB
Position
1841675..1841908
AA seq 77 aa
MNKQQNNLQDIFLNSARKNKIPVTVYLSTGFKLNGIVKGFDSFTVILDSEGKQMLIYKHA
ITTVTPEKPILFVDNES
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaataagcaacaaaataatctacaagatatatttttaaacagtgcaagaaaaaataaa
atacctgtaacagtatatctttcaactggttttaaattaaatggaattgtaaagggcttt
gacagttttactgttattttagattctgagggtaaacaaatgcttatatataaacatgca
ataaccactgtaactccagagaaaccaattttatttgtagataatgaaagctaa

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