Clostridium baratii: U729_1119
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Entry
U729_1119 CDS
T03506
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB, AddA subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbv
Clostridium baratii
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_1119 (addA)
Enzymes [BR:
cbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U729_1119 (addA)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U729_1119 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Mab-21
AAA_12
DEAD
ResIII
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AIY82957
UniProt:
A0A0A7FTM2
LinkDB
All DBs
Position
1210536..1214249
Genome browser
AA seq
1237 aa
AA seq
DB search
MGETKWTKEQRKAIDTRRCNLLVAAAAGSGKTAVLVERIIKIVTDEKNPVDIDKLLVVTF
TSAAAAEMRERIAAAITKALERNPSSKILQRQLTLLSRANITTMHSFCLDVIKNNFHTID
LDPAFRIGDETEGTLLKNEILDEMFEDYYEKDDMEFFNLVEAYSGSKDDEKLKEMVLDLY
RFSMSGPWPEKWLTEKAEEFNISSLEELDKTVWVEVLKNDINMEVDSFINLYYKAIEMIN
DTEGIEEYLDTFNDELSRIINLKESLDLGLSEIYDKLFKISFGRLKSIRKNKVSDVDAQN
LVKSIRDEVKKKICKLQDDIFMLSPTEMLEGINLTYPFMKKLSEITLEFSKRFSERKKEK
NMLDFNDLEHLCLKILIDKTEEGDIVPSKISENFRELFDEVLVDEYQDSNNVQEAIINLV
SRKNTDNPNVFMVGDVKQSIYRFRQAKPELFLEKYNTYSRNDEGKNKVIQLYKNFRSREE
VINAVNYIFKEVMSLNVGELEYTEDEALNLGANFKELNEEGAYKGGEVELHVLDKNITSE
NEDEDEEDIDSINLEARVVARRINELMSQANEEKFRVLDKETGEYRPLKYKDIVILLRAT
KNWSEIFLDELGLSGIPVYADTGSGYFESIEIRTIMSLLKIIDNPLQDVPMIAVLKAPFA
RFNAEELADIRMIDKSKYFYENILEIVNEDIEVSGELKKKCSIFIENLNKWRDKSVYTPI
DEFIWYLYMDTSYYGYVGAMPNGVLRQANLKILFQRAKQYEETSFKGLFNFINFINKLRK
SSGDMGSAKILGENEDVVRIMSIHKSKGLEFPVVFLSGAGKQFNLMDLNNRILHHDDLGF
GPDYIDLDKRISYSTLPKEAIKKKIRLETLSEEMRILYVAFTRAKEKLIITGATRDIDKT
VEKWVQAASVEKSKISPAEVLKGKSYLDWIGMALCQHKDGEPLRGRIGVSSGIAKDDLST
WKVNLWDSSNLFVEKNLDAVDEISIDEELFINSRAETVDKEIARRLGYEYKYLDSTTIKS
NISVSDLKKAGYEPSDEYRGESLFKEKPVLKPRFLQEKKGLSGAERGTAMHFVMQKIDYD
RVDSLENIKMQLEEMLQNELLTKDEFKAINPYKIYNFFKSDLGKNILKVYNEGGIIHREL
PFFTRISASKVKEDISKESYNEEVRLQGVIDLFFELDGEIILVDYKTDYVKDNIEEEMNR
RYKIQLDYYSDAIKKITGKVVNKRYLYLFYIDKEIEL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggggagactaaatggacgaaagaacaacgtaaagctatagatactagaagatgtaat
cttttagttgcagctgcagcaggttcagggaagactgctgttttagttgagagaataata
aaaatagttacggatgaaaagaatcctgttgatatagataaacttttagttgttacattt
acaagcgcagcagctgccgaaatgagagaaagaattgcagctgcgataacaaaagcttta
gaaagaaatcctagttcgaaaattttgcaaagacaattaactcttttaagtagagcaaat
ataacaactatgcactcattttgcttagatgtaataaagaataactttcatactatagac
ttagacccagcttttagaattggagatgaaactgaaggtacgcttcttaaaaatgaaata
ttagatgagatgtttgaagactattatgaaaaagatgatatggaatttttcaatttagta
gaagcttattctggaagtaaggatgatgagaaattaaaagaaatggtattagacctttat
agattctctatgagtggaccttggccagaaaaatggttaacagagaaagcagaagaattc
aatatatcttcactagaagaattagataaaacagtatgggtagaagttttaaagaatgat
atcaatatggaagttgatagctttataaatttatattataaagctattgaaatgattaat
gatacagaaggtatagaggaatatttagatacatttaatgatgaattatcaagaattata
aatcttaaagaatcattagatctagggctttcagagatatatgataaactttttaaaata
tcttttggaagacttaaatcaataagaaagaataaagtaagtgatgtagatgctcaaaat
ttagttaagtctataagagatgaggttaagaagaaaatttgtaaacttcaagatgatata
tttatgttaagtcctactgaaatgctagaaggaattaatttaacatatccttttatgaaa
aaattatctgaaataacgttagagttttctaaaagatttagtgaaagaaaaaaagagaaa
aatatgctagattttaatgatttagagcatctttgtttaaagatattaattgataaaaca
gaagagggagatatagtaccatcaaagatatctgaaaactttagagagttatttgatgaa
gttttagtagatgaatatcaagattcaaataatgttcaggaggctattataaatcttgta
tctagaaaaaatacagataatccaaatgtatttatggttggagatgtaaaacaaagtatt
tatagatttagacaagcaaaaccagaacttttcctagaaaaatacaatacttattcaaga
aatgatgaaggaaaaaataaagtaatccagttatataaaaacttcagaagtagggaagaa
gttataaatgcggttaactatatttttaaagaagttatgtctctaaacgttggagaactt
gagtatacagaagatgaggccctaaacttaggagctaattttaaggaattaaacgaagaa
ggggcttataaaggtggagaagtagagcttcatgtattagataaaaatattacaagtgaa
aatgaagatgaggatgaagaggatattgattcaataaatcttgaggctagagtcgtagca
agaagaattaatgaacttatgtctcaggctaatgaagaaaaatttagggttttagataaa
gaaactggtgaatatagaccattaaagtataaagatatagttattttattaagagccact
aagaattggtcggaaatatttttagatgaactaggcctttctggaataccggtttatgca
gatacaggatcaggttattttgaatcaatagagattagaactataatgtctcttttaaaa
ataatagataatccacttcaagatgttcctatgattgcagttttaaaggcaccttttgct
agatttaatgcagaggagcttgcagacataaggatgattgataagagtaaatatttctat
gaaaatatacttgaaatagtaaatgaagatattgaagtttcaggtgaattaaagaaaaaa
tgcagtatctttattgaaaatttaaataagtggagagataaatctgtatatactcctatt
gatgagtttatatggtatttatacatggatacttcttactatggatatgtaggagcaatg
ccaaatggagttttaagacaggcaaatttaaaaatattattccaaagagcaaagcaatat
gaagaaactagctttaaaggattatttaattttataaacttcataaacaaacttagaaaa
tcatcaggggatatgggaagtgcaaagattcttggagaaaatgaagatgtagttagaatt
atgagtatccataaaagtaagggattagaattcccggtagtattcttatctggagctgga
aagcaatttaatttaatggatctaaataatagaatacttcatcatgatgatttaggattc
ggaccagattatatagatttagataaaagaataagttatagtactcttcctaaggaagct
ataaagaaaaagataagattagaaactctttcagaggaaatgagaatactttatgtggca
tttactagagcaaaagaaaaattaataataactggagctactagagatattgataaaact
gtggaaaagtgggttcaagctgcaagtgtggaaaaatctaagatttctccagcagaagtt
ttaaagggaaaaagctatttagattggattggaatggctctatgtcaacataaagatgga
gagcctcttagaggaagaatcggtgtttcaagtggaattgctaaagatgacttatccaca
tggaaggtaaatttgtgggatagtagcaatctatttgtggaaaaaaatttagatgctgtg
gatgaaatttcgattgatgaggaactgtttataaattctagagctgaaactgtggataaa
gaaattgcaagaaggttaggatatgaatataagtatttagatagtacaacaataaagagt
aatatttcagtatcagatttaaagaaagctggatatgagccttctgatgaatatagaggg
gaaagtttatttaaagaaaaacctgttttaaaacctagattccttcaagaaaaaaaaggg
ttatccggtgcagaaagaggtactgcaatgcattttgttatgcaaaagatcgattatgat
agggtagactctttagaaaatataaaaatgcagcttgaagaaatgcttcaaaatgaatta
ctgactaaagatgaatttaaagctataaatccatacaagatatacaacttctttaaaagt
gatttagggaaaaatattcttaaagtatataatgaaggaggtattattcatagagaatta
cctttctttacaagaataagtgcatctaaagtgaaagaagatatatcaaaagaatcttat
aatgaagaggtaaggcttcaaggtgtaattgaccttttctttgaattagatggagagatt
atacttgtagattataaaactgattacgtgaaagataatattgaagaagagatgaataga
agatataaaattcaacttgattattatagtgatgcaataaaaaaaataacaggtaaggta
gtaaataagagatatttatatttattttatatagataaggaaatagaactgtaa
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