Clostridium botulinum A2: CLM_2020
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Entry
CLM_2020 CDS
T00883
Symbol
dacF
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cby
Clostridium botulinum A2
Pathway
cby00550
Peptidoglycan biosynthesis
cby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM_2020 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cby01002
]
CLM_2020 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cby01011
]
CLM_2020 (dacF)
Enzymes [BR:
cby01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLM_2020 (dacF)
Peptidases and inhibitors [BR:
cby01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CLM_2020 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
cby01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CLM_2020 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Bee_toxin
Motif
Other DBs
NCBI-ProteinID:
ACO85280
UniProt:
C1FP00
LinkDB
All DBs
Position
complement(2087054..2088277)
Genome browser
AA seq
407 aa
AA seq
DB search
MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKKEEKAEDKDSNKEGDSDVDAKSAL
LIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS
TMLLDVGEERTVEELLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQKLNMKDTSF
KNCTGLSAEGHKTSAYDIAIMSRELLKHKQILKYTGTYMETISEGRKSPIGLVNHNKLVR
FFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLMNYGFSKFE
CKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKAKITNKCIIDENKKEYKIN
EEVGICEFYSDGNLIGKVKITSDRNIRKSGIFNHFKGGFERLIDKGI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaaatttattactttttcagtgtaataattaccataacttttattttcggt
gtgtttgtaacaccagtaagcgcatatgaccaacaaaatcagttaaaaaaagaagaaaaa
gcggaagataaagattctaataaagaaggtgattcagatgtagatgctaaatcagcactt
cttattgaacctacaacaggaaaggttatttatgaaaaaaatcctcatgaaaaatttgct
ccagcatcagttacaaaaattatgacaatgcttctatcaatggaagcagtagatagtggc
aaaataaagttaactgataaagttactataagtgaaaatgctaaaaaaatgggcggaagc
accatgcttttagatgtaggagaagaaagaactgttgaagaacttttaaaaggtatagcg
atagcttctgggaatgatgctgcagtagctatgggagaatacttagcaggaagcgaagaa
gctttcgtaaaaatgatgaatgatagagcacaaaaattaaatatgaaagatacgtctttt
aaaaattgtactgggcttagtgcagaaggtcacaaaacttcagcctatgatatagctata
atgtcaagagaactattaaaacataaacaaatattaaaatatacaggaacatatatggaa
accatatcagaaggaaggaaaagccctataggattagtaaatcataataaacttgttaga
ttctttaaaggctgtgatgggctaaaaacaggatttacagatgaagctaaatattgtata
tcagccacagcaaaaaaagatggagtaagaatgttagcggtaataatgggagctccaact
tataaaataagaaataaagatgctagtaaacttatgaattacggattttcaaaatttgaa
tgcaaaactttagttaaaaaaggagatgtaatatcaaaggtacctttaaattctaaagga
gataaatactttatggcaaaatcctgtgaagaattagatgctataatagaaaaaggtaag
aaagcaaaaataactaataaatgtattatagatgaaaataagaaagagtataaaataaac
gaagaagttggtatatgtgagttttattcagatggtaatttaataggtaaagttaagata
acttctgataggaatataagaaaatcaggaatttttaatcactttaaaggtggatttgaa
aggttaatagataagggtatataa
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