Chlamydia caviae: CCA_00691
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Entry
CCA_00691 CDS
T00125
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cca
Chlamydia caviae
Pathway
cca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCA_00691 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cca03021
]
CCA_00691 (rpoB)
03400 DNA repair and recombination proteins [BR:
cca03400
]
CCA_00691 (rpoB)
Enzymes [BR:
cca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCA_00691 (rpoB)
Transcription machinery [BR:
cca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCA_00691 (rpoB)
DNA repair and recombination proteins [BR:
cca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCA_00691 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AAP05433
UniProt:
Q822J1
LinkDB
All DBs
Position
complement(799383..803141)
Genome browser
AA seq
1252 aa
AA seq
DB search
MFKCPERVSVKKKEDILDLPNLIEIQIKSYKQFLQIGKLAEERDNVGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPEECIRRGITYSVTLKVRFRLTDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVIVSQVHRSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDL
IYIHIDRKKRRRKILAMTFIRALGYSSDADIIEEFFQIEERSLKSEKDFTLLVGKILADN
VLDESSSLVYGKAGEKLSTAMLKRMLDADISTLKIAVEADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDSKRYNLGRVGRYKLNRKLGFPMDEETLSQVT
LRKEDVIGALKYLIRLKMGDERASIDDIDHLANRRVRSVGELIQNQCRSGLARMEKIVRE
RMNLFDFSSDTLIPGKIISAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVR
DGVVTDEIEYMTADVEEECVIAQASAALDEYNMFVDPVCWARCRGEAFEADTSTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLEARAAKDSGAI
VVAEEDGVVDYVDGYKVVIAPKHNPTLKRTYDLKKFLRSNSGTCINQRPLCSVGDVIVKG
DVIADGPATDQGELALGKNILVAFMPWYGYNFEDAIIISEKLIKQDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSEEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKG
YKNQVSVLKTEYREKLGALLLNEKAPASIIHRRTADILVQEGTVFDQETIELLEQESLVD
LLMPPCEMYDVLKGLLSDYETSLQRLEVNYKTEVEHIREGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIHVKTPVFEGFPESRIWDMMIEQGLPADGKSYLYDGKTGERFDNTVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVSGRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatgcccggagcgggttagcgtcaaaaaaaaggaagacatcttagatcttcca
aatcttattgaaattcaaattaaatcttataagcaatttcttcagattgggaagcttgcg
gaagagcgcgataatgtcggcttggaagaagtttttagagagatctttccaattaaatct
tacaatgaagctactatcttagagtatctgtcttataacttaggtgtgccgaaatactct
cccgaagagtgtatccgtagagggatcacctacagtgtaactctaaaagttcgcttccgt
ttgactgatgaaacaggtatcaaagaagaagaagtctatatgggaactatacccattatg
acagataaaggtacctttattattaacggtgctgaaagagttattgtttctcaggtacac
aggtctccaggaattaattttgagcaagaaaagcactctaaaggaaacattttgttttcc
ttcagaattattccttatcgaggtagctggttagaagctatttttgatatcaatgactta
atttatatccatattgatagaaaaaaacgtcgccgcaagattttagctatgacgtttatt
cgtgctttagggtattcatctgacgctgatattattgaagagtttttccaaatagaagag
cgctctttaaagagtgaaaaagacttcacccttttagttggtaaaatcttagcggataat
gttctcgacgaatcctcctccttggtttacggaaaagctggtgaaaaacttagtacagca
atgttaaaacgtatgctggacgcggatatttcaactttaaaaatagcggtagaggcagat
gagaatcaccctatcatcaaaatgttggcgaaagatccaacagactcttatgaagctgct
ttaaaagatttctatagaagattacgtccaggagagcctgcaacattagctaatgcgcgt
tctacaattatgcgtctattctttgattctaagcgttataacttaggaagagtaggtcgt
tataagttgaatagaaagctcggcttcccaatggacgaagagactctatcacaagttact
ctgagaaaagaagatgtcatcggtgctttaaagtatcttatccgcttaaaaatgggtgat
gagagagcctcgattgatgatattgatcacctagcaaaccgtcgtgtacgttccgtaggg
gaattaattcaaaaccaatgccgttctggcttggctagaatggagaaaatcgttcgtgag
agaatgaatctatttgatttctcttccgatacattaattcctggaaaaattatttccgcg
aaaggtctagcaagtgttttgaaagacttttttggtcgctcccaactttctcaatttatg
gatcaaaccaaccctgtagcggaattaacgcataagcgtcgtttgtcagctttaggtcct
ggtggtttgaatagagaaagagctgggtttgaagttcgtgacgtacatgcgagccattat
ggacgtatttgtccgattgaaactccagaaggaccaaacattggtttgattacttcgctc
tcttcttttgcgaaaatcaatgaatttggatttattgaaactccctaccgcattgttaga
gatggtgttgtcactgatgaaattgaatacatgacagccgatgttgaagaagaatgcgtt
attgctcaggcttcagcagctctagatgaatataatatgtttgtggatcctgtatgctgg
gcaaggtgtcgtggagaggcttttgaagctgatacgagtactgttacacatatggacgtt
tctccaaaacaattggtctcgattgttacaggtttgattccatttttagaacatgacgac
gctaaccgtgctctcatgggatcaaacatgcaacgtcaagctgtccctttgttgaaaact
gaagctcctatagttggaacaggattagaagctcgcgctgctaaagattccggagctatt
gttgttgctgaggaagatggagttgttgactacgtggacggttataaggtcgttattgca
cctaaacataacccaacattgaaacgtacttacgatcttaaaaaattcttaagatctaat
tcaggtacatgtatcaaccaacgacctctatgtagtgttggagatgtcatagttaaaggt
gatgttattgccgacggtcctgctacagatcaaggagagcttgctttaggaaaaaacatc
ttagttgccttcatgccatggtatgggtacaactttgaggatgcgattattatttctgaa
aagctcatcaagcaagatgcgtatacttcaatttatattgaagaattcgaattaacagct
agagatacaaaattaggaaaagaagagattactcgtgatattcctaatgtttctgaagaa
gttttagctaatttaggtgaggacgggattatccgtattggtgctgaagtaaagcctggt
gatattcttgttggtaaaattacaccaaaatcagaaacagaactcgctcctgaagaacgc
ctattacgcgctatctttggtgagaaagctgctgatgttaaagatgcttctttgacagta
cctccgggaacagagggcgttgtcatggatgttaaggtctttagtagaaaagacagacta
tccaagagtgatgatgagcttgtagaagaagctgttcatttaaaagatttgcagaagggt
tataagaatcaggtttcggtattaaagactgaataccgtgagaaacttggagccttatta
cttaatgagaaagctcctgcttcgattattcatcgccgtacagcagatattttggttcaa
gaaggtacagtatttgatcaagaaactatagagcttcttgaacaagagtctttagttgat
ttgctcatgcctccttgtgaaatgtatgacgtcttaaaaggtctactttctgactatgag
acttctttacaacgcttagaagtcaattataaaacagaagttgagcatatccgtgaagga
gatgctgatcttgaccatggtgtcattcgtcaggttaaagtttatgttgcttcaaaaaga
aagctccaagttggagataaaatggctggacgccatggaaacaaaggtgttgtttctaag
atcgttcctgaagctgacatgccttatctagctaatggtgaaactgtacagatgatctta
aatcctcttggggtgccttcgaggatgaacctaggccaggtattggaaacgcatcttggt
tatgctgcaaaaactgccggcattcatgtaaaaactccagtatttgaaggattcccagag
tctcgtatttgggacatgatgatcgaacagggattacctgcagatggtaagtcttaccta
tacgatggaaagactggagagagattcgataatactgtagttattggctacatttatatg
ttgaaactcagccacctgattgcggataaaatccacgctagatctattggaccttactct
ctagtaactcagcaacctcttggaggtaaagctcagatgggaggtcaaagatttggggag
atggaagtgtgggctttagaagcttatggtgtagctcatatgcttcaagagattcttaca
gtaaaatcagacgacgtttctggacgaacaaggatttacgaatccattgttaaaggagaa
aacctccttaaatcaggtacgcctgagtcgtttaacgttttgattaaagaaatgcagggt
ctaggacttgatgttcgtcctatggtagtagatgcttaa
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integrated database retrieval system
