Cutaneotrichosporon cavernicola: CcaHIS019_0111000
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Entry
CcaHIS019_0111000 CDS
T09540
Symbol
kap104, CcaverHIS019_0111000
Name
(RefSeq) uncharacterized protein
KO
K18752
transportin-1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0111000 (kap104)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0111000 (kap104)
03009 Ribosome biogenesis [BR:
ccac03009
]
CcaHIS019_0111000 (kap104)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CcaHIS019_0111000 (kap104)
Ribosome biogenesis [BR:
ccac03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CcaHIS019_0111000 (kap104)
Pre-60S particles
CcaHIS019_0111000 (kap104)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT_2
TOR1L1_N
HEAT_GCN1
HEAT
TPR_IMB1
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
Cnd1
HEAT_GCN1_C
Adaptin_N
MMS19_C
TPR_DNAAF5
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
85492253
NCBI-ProteinID:
XP_060453648
UniProt:
A0AA48I8Y9
LinkDB
All DBs
Position
1:complement(join(2951886..2952065,2952103..2952582,2952618..2954282,2954318..2954662,2954766..2954867))
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AA seq
923 aa
AA seq
DB search
MSSWTPNQDGLQEVLGMLRDSASPDPNVQKHVATRLKELRFIPNFLAYLAHILVFATSEV
GTHRTVAGLVLKNALIERSGQPVTDSDAQAMEYVKQASLAGLQEADKMIRHTSGSVVMAI
LYTENTGAWPQALDVLTKGLSSQDENLVEGVLNTFQKVAEDCPQRLDITIQGASLFEHLV
PLFIQFTGHSDARNRLYALETLQCLIALRTPALMAQLENYLQALFARASDDSPDVRRTVC
AALGLILASRPDKLVPQMKNVVDYITYCTKDEDESVALEACEFWLTFAEDPNLKSQMQPY
LEKIVPLLLEGMVYSEVDLLYLDNDEDDEAVPDKETDIKPHLYSGKAHGVGESNEAASAQ
KGGQSREAAEQAFDDDDDDDDDYYDDDDDDASAEWNIRKCSAAALDVMAVSFRGDLLNIL
LPHLKDRLFHQEWTYRESGILALGAIAEGCIEGLEPHLPQLVPWLIEALKDRKALVRSIT
CWTLGRYSSWVVAVSTENKQSFFLPTMEGLLQMVLDGNKRVQEAGCSAFATLEEEAGGEL
VPFLEPILRNLTYAFTKYQQKNLLILYDAIGTLADSVMHALGTEKYMEILMPPLIDKWMK
LSDSDPDLVPLLECLSSVTLAAGKAFGPYASPVYQRCITIISTSLAQWNAYLGNPNEVHE
PDRTFIVVALDLLSGLAQGLAEQMPALIESTQPPLLTLIAACLTHFEPPVRQSAHALLGD
MAMTCFPLLRPYVPDLMPSIIEQIIPEPQQDSISVCNNAAWAAGEIAIQYQGDASPIEPF
VDDLIQRLIPILLNAKSPKSLSENAAVTIGRLGLVAPDRVAPHLGTFAQAWCAALWEIKD
NDEKDSAFRGFCMLIVKNPAGLENSFIWFCNAVCKWQHPSRELDDMFRQILQAFKNQLGA
QWEQQTSSFPTVIRERLRERYQV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttggactcctaaccaggatgggctccaagaggtcctcggcatgctgcgcgac
tctgctagcccagaccccaacgtccagaagcatgtcgccacgcgcttaaaggagcttaga
ttcatcccaaatttcctcgcctacttggcccacatcctcgtctttgccacgagcgaagtg
ggtacgcaccgcacagtcgccggtctggtgctcaagaacgccctcattgagcggagcgga
cagcccgtcacggacagcgatgcccaggcgatggagtacgtcaagcaggcctcgcttgct
ggcttgcaggaagcggacaagatgatccgccacacctctggcagtgtcgtcatggccatt
ctctacactgagaacactggcgcttggccacaagcgctcgacgtcttaacaaagggcctg
agctcgcaggacgaaaacctcgtcgagggtgtcctcaacactttccaaaaggttgccgaa
gactgtcctcagcgtctcgacattaccatccagggcgccagcctgtttgagcacctcgtc
ccactgtttatccagttcactggccactcggacgcgcgcaaccgtctctacgcgctcgag
acacttcagtgcctgatcgctttacgcactcctgcgctcatggcgcagcttgagaactac
cttcaagctctctttgcgcgcgcgtcggacgactctcccgatgtccgccgcaccgtgtgt
gctgctcttggcctgatccttgccagccggccagacaagctcgttccgcagatgaagaac
gtcgtcgactacattacctactgcaccaaggacgaggacgagtcggtagcgctggaggcg
tgcgagttctggctcactttcgccgaggaccccaacctcaagtcgcagatgcagccgtac
cttgaaaagattgtccctctcctcctcgagggcatggtgtactctgaggttgacctcctc
tacctcgacaatgacgaggacgacgaggcagtccccgacaaggagaccgacatcaagccc
cacctctacagcggcaaggcgcacggtgttggcgagtccaacgaggctgcgtcggcgcag
aagggtggccaatcccgtgaggcggccgagcaggcatttgacgacgatgatgatgacgat
gacgactactacgacgatgatgacgacgacgcctcggccgagtggaacatccgcaagtgc
tcggccgctgcgctcgacgtcatggccgtctcgttccgtggcgacctcctcaacatcctc
ctccctcacctcaaggaccgcctcttccaccaggagtggacctatcgggagagcggtatc
cttgcacttggtgcgattgccgagggctgcatcgagggcctcgagcctcacctcccccag
cttgtgccctggctcattgaggcgctcaaggaccgcaaggcgctcgtccgctcgattacc
tgctggactctcggacgttactcgagctgggtcgtcgctgtctcgaccgagaacaagcag
agcttcttcctgcccacaatggagggtctcctccagatggtcctcgacggcaacaagcgc
gtgcaggaggcaggctgcagtgcgtttgccacgctcgaggaggaagctggcggcgagttg
gtccccttccttgagcccatcctgcgtaacctcacctacgcgttcaccaagtaccagcag
aagaacttgctcatcctgtacgacgctatcggtactcttgccgactctgtcatgcacgct
ctcggcaccgagaagtacatggagatcctcatgcctcctctgatcgacaagtggatgaag
ctgagcgacagcgaccccgaccttgtcccgctcctcgagtgcctttcgtcggtcaccctc
gctgcgggcaaggcattcggtccctacgcttcccctgtgtaccagcgctgcatcaccatc
atcagcacctcgctcgcgcagtggaatgcctacctcggcaaccccaacgaggtgcacgag
cctgaccgcacgttcatcgtcgtcgcgctcgacctcctctcgggccttgcgcaaggtctt
gcggagcagatgccggccctcatcgagtcgacgcagccgcctctccttacgctcattgcg
gcgtgtctgactcactttgagcctcctgtccggcagtcggcgcacgcgttgcttggtgat
atggccatgacctgcttcccccttctgcgcccctacgtgccggacctgatgccctcgatt
atcgagcagatcatccccgagccccagcaggacagcatcagcgtctgcaacaacgctgcc
tgggcagctggcgagattgccatccagtaccagggcgacgcctctcccatcgagcccttc
gtagacgacctcatccagcgtctcatccccatcctcctcaacgccaagtcaccaaagtcg
ctctcggagaacgccgctgtcacgattggtcgtcttggcctggttgcgcccgaccgtgtc
gcgccccacctcggcacctttgctcaggcctggtgcgcagccctgtgggagatcaaggac
aacgacgagaaggactcggcgttccgcggcttctgcatgctcattgtcaagaaccctgct
ggtcttgagaacagcttcatctggttctgcaacgccgtgtgcaagtggcagcacccctct
cgggagctcgacgacatgttccgccagatcttgcaagcattcaagaaccagctcggtgct
cagtgggagcagcagacgtcgtcgttcccgactgtcatccgcgagcgccttcgtgagcgc
taccaggtttaa
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