Cutaneotrichosporon cavernicola: CcaHIS019_0704130
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Entry
CcaHIS019_0704130 CDS
T09540
Symbol
ERF1, CcaverHIS019_0704130
Name
(RefSeq) uncharacterized protein
KO
K03265
peptide chain release factor subunit 1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CcaHIS019_0704130 (ERF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0704130 (ERF1)
03012 Translation factors [BR:
ccac03012
]
CcaHIS019_0704130 (ERF1)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CcaHIS019_0704130 (ERF1)
Translation factors [BR:
ccac03012
]
Eukaryotic type
Release factors
CcaHIS019_0704130 (ERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Cas3_I-F_Cas2
Motif
Other DBs
NCBI-GeneID:
85498702
NCBI-ProteinID:
XP_060460097
UniProt:
A0AA48QYR6
LinkDB
All DBs
Position
7b:join(481130..481165,481197..481360,481664..482783)
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AA seq
439 aa
AA seq
DB search
MSSQEETDHAIEIWRYRKLLTMLAASRGAGTSCITLILPPKSQISQASNMLTTEYGTASN
IKSRVNRLSVLSAITSTQQKLKNYSRVPDNGLCVFVGTVLNDEGKERKISFALEPFKPIN
TSLYMCDSRFHVEALEELLETDSKWGFIIMDGNGSLFGTLSGNTREILYKFSVDLPKKHG
RGGQSALRFSRLRDEARRNYVRKVAELAVQHFITADRVNVAGLVLAGSAELKTDLSSSDL
FDGRLLAKVVKVVDVSYGGENGFNQAIELAADSLANVKFVQEKKLIQKYFDEIALDTGKY
CFGISDTLKALDMGAVETLIVWEGLDTVRNVLRNSAGEEIIVFSMPKETDREKFIDKATG
TEMEVASEAKPLLEWFAEEYKNFGATLEFVTNKSQEGSQFVKGFGGIGGLLRYKVAFEDL
DDLDDEDDEFYGSDEDSDI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccaggaagagaccgaccacgccatcgagatctggcgctaccgcaagctcctc
acgatgcttgcggcctcgcgcggcgcgggcacttcgtgtatcaccctcattctcccgccc
aagtcgcagatctcgcaggcgtcaaacatgctcacgaccgagtacggtacagcgtctaac
attaagtcgcgcgttaaccggttatccgtcctgtctgccatcacgtccacccagcagaag
ctcaagaactactcgcgcgtccccgacaatggcctctgcgtctttgtcggcacggtgctc
aatgacgagggcaaggagaggaagatttcattcgcgctcgagccgttcaagcccatcaat
acctcgctgtacatgtgcgactcgcgtttccacgtcgaggccctcgaggagctactcgag
actgactcgaagtggggcttcatcatcatggacggtaacggatcgctgttcggcaccctg
tccggcaacacgcgcgagattctctacaagttcagcgtcgacctgcccaagaagcacggt
cgtggtggtcagtcggcgctgcgtttctcgcgtctgcgtgacgaggctcgtcgcaactat
gtgcgcaaggtcgcagagttagccgtccagcactttatcacggccgacagggtcaacgtc
gcaggtcttgtgttggcaggttctgccgagctcaagaccgacctgtctagctcggacctg
tttgacggtcgtctcctcgccaaggttgtcaaggttgtcgacgtgtcgtacggtggcgag
aacgggttcaaccaggccatcgagctggccgccgactctcttgccaacgtcaagtttgtg
caggagaagaagctcatccagaagtactttgacgagattgccctggacacgggcaagtac
tgcttcgggatcagcgacacgctcaaggcgctggacatgggtgccgtcgagactctgatt
gtctgggagggcctcgacactgtgcgcaacgttctgcgcaactcggccggcgaggagatc
atcgtcttctccatgcccaaggagacggaccgcgaaaagttcattgacaaggcgaccggt
accgagatggaggtcgcctccgaggccaagcccctcctggagtggtttgctgaggagtac
aagaactttggcgcgacactcgagtttgtcaccaacaagtcgcaggagggatcgcagttc
gtcaagggctttggcggtattggcggcctccttcgttacaaggtcgcgtttgaggacctg
gacgaccttgacgacgaggacgacgagttctacggctcggacgaggactcggacatctaa
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