Cervus canadensis (wapiti): 122432018
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Entry
122432018 CDS
T07554
Symbol
SEMA4D
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122432018 (SEMA4D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccad04090
]
122432018 (SEMA4D)
CD molecules [BR:
ccad04090
]
Proteins
122432018 (SEMA4D)
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GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_3
Ig_5
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
122432018
NCBI-ProteinID:
XP_043309653
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Position
30:21544281..21676566
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AA seq
863 aa
AA seq
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MRMCAPVGGLLTALAVVFGTAVAFAPVPRITWEHREVQLVQFHEPGIFNYSALLLSEDED
TLFVGAREAVFALNAHNISKKQHEAYWKASEDKKARCAEKGKSKQTECLNYIRVLQPLST
SALYVCGTNAFQPACDHLNLTSFKFLGKNEDGKGRCPFDPAQSYTSVMVDGELYSGTSYN
FLGSEPIISRNSTHSPLRTEYAIPWLNEPSFVFADVVRESPEGEDLGDDRVYFFFTEVSV
EYEFVFKLMIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSRPDSNLVFNVLRDVFVLR
SPDLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVEQSHTKWVRYNG
AVPTPRPGACINREARAANFSSSLNLPDKTLQFVKDHPLMDESVTPIDSRPRLIKGDVNY
TQIVVDRTRALDGTIHDVMFVSTDRGALHKAISLENDIHIIEETQLFQDFEPIQSLLLSS
KKGRKFVYAGSNSGVVQAPVAFCGKHGTCEDCVLARDPYCAWSPAMASCVALHQTDGPSR
GLIQEMNGDASTCPDKIKESYLQHFFKHGGTAELKCSQKSNLARVVWKFQNGVLKAESPK
YSLVGRKNLLIFNLSEGDSGVYQCLSEERVKNKTILQVVAKHVLEVKTVPRTTVASTSPA
TRTEGSRITPRVSVGPTPVSFPQTPAVRVTTPGAEPPPSSPVAPTSTSCEPKIVINTVPQ
VHSEKTLYLKSSDNRLLMFLFLFFFALFLCLISYNCYKGYLPGQCLKFRSAMLLGKKKPT
SDFSDFEQSVKETLVEQGSFSQQNGGQPKPALDTGYETEQDTMASRLPTDREDSQKIDEL
PGRDRPFDVKCELKFADSDADGD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtgtgcccctgttggggggctgctcaccgccctcgccgtggtgtttgggacg
gccgtggcgtttgctcccgtacctaggatcacctgggagcacagagaggtacagctggtg
cagtttcacgagccgggcatcttcaactactcggccctgctgctgagtgaggacgaggac
accttgttcgtgggtgcccgggaagccgtgtttgccttaaacgcacacaacatctccaag
aagcagcatgaggcttattggaaggcctcagaagataagaaagcaagatgtgcagaaaag
gggaaatcaaaacagacagaatgcctcaactacatccgtgtgcttcagccgctcagcacc
agcgccctttacgtgtgcgggaccaacgcgttccagccagcctgtgaccacctgaactta
acatccttcaaatttctggggaaaaatgaagatggcaaaggaaggtgtccctttgaccca
gcacagagttacacgtctgtcatggtcgatggagagctttattccgggacgtcgtataac
tttttgggaagtgaacctatcatctcccgaaattccacccacagtcctctgaggacagaa
tatgcgattccttggcttaacgagcccagcttcgtgtttgctgacgtggtacgagagagc
ccggagggcgaggacctcggggacgacagggtgtacttcttcttcacggaggtgtctgtg
gagtacgagtttgtcttcaagctgatgatcccccggatagcgagggtctgcaagggagac
caaggcggcctgaggaccttacagaagaagtggacctccttcctgaaggccaggctcatc
tgctcccggccggatagcaacctcgtcttcaatgtgctgcgggacgtcttcgtcctcagg
tctccggacctgaaggagcccgtgttctacggggtcttcaccccgcagctgaacaacgtg
gggctgtcggccgtgtgcgcctacaacctgtccacggccgaggcggtcttctcccgtggg
aagtacatgcagagcgccacggtggaacagtcccacaccaagtgggtgcgctacaacggg
gctgtgcccacgccgcggcctggggcgtgcatcaaccgggaggcacgggcggccaacttc
tctagctccctcaacctgccggacaagaccctgcagtttgtcaaagaccaccctctgatg
gatgagtccgtgaccccgatagacagcaggccccggctgatcaaaggtgacgtgaactac
acgcagattgtggtggacaggacccgggccctggatggaaccatccatgatgtcatgttt
gtcagcacagaccggggtgccctgcacaaagccatcagcctcgagaatgacatccacatc
attgaggagactcagctcttccaggacttcgagcccatccagagcctgctgctgtcttcc
aagaagggcaggaagtttgtctacgccggctccaactcgggcgtggtgcaggcccctgtg
gccttctgcgggaagcatggcacctgcgaggactgcgtgctcgcccgggacccctactgc
gcctggagcccggccatggcctcctgtgtcgccctgcaccagactgacggccccagcagg
ggcctgattcaggaaatgaacggggacgcatccacttgccctgataaaattaaagaaagt
tacctgcagcattttttcaagcatggcggcacagcagaactcaaatgttcccaaaagtcc
aacctggcccgggtggtatggaagttccagaatggcgtgctcaaggccgaaagccccaag
tacagcctggtaggcagaaagaacctgctcatcttcaacctgtcagaaggagacagcggg
gtgtatcagtgcctgtcggaggagagggtcaagaacaagacaatcttgcaggtggtggcc
aagcatgttctggaggtcaagacagtcccgcgaaccacagtggcctctacctcgccggcc
acacggacagaaggcagtcggatcacccctagagtgtcagtggggcccaccccagtctcc
tttccccagaccccagctgtgcgggtcaccacgccgggtgctgaacccccaccatccagc
cccgtggcacccaccagtacgtcctgcgaaccaaagatcgtcattaacacggtcccgcaa
gtccactcggagaagacactgtatctcaagtccagtgacaaccgcctcctcatgtttctt
ttcctcttcttcttcgccctcttcctctgcctcatctcctacaattgctataagggctac
ctgcccggacagtgcttgaaattccgctcggccatgctcctcgggaagaagaagcccacg
tcagacttctcagactttgagcagagtgtgaaggagacgctggtggagcagggcagcttc
tcccagcagaatgggggacagcccaagccggccctggacaccggctacgagacagagcag
gacaccatggccagccggctgcccacggaccgggaggactcgcagaagatcgacgagctc
ccgggcagggaccggccgttcgacgtcaagtgcgagctgaagttcgccgactcggacgcg
gacggggactga
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