Cervus canadensis (wapiti): 122437161
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Entry
122437161 CDS
T07554
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04151
PI3K-Akt signaling pathway
ccad04510
Focal adhesion
ccad04512
ECM-receptor interaction
ccad04820
Cytoskeleton in muscle cells
ccad04974
Protein digestion and absorption
ccad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122437161 (COL9A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122437161 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122437161 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122437161 (COL9A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122437161 (COL9A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122437161 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccad00535
]
122437161 (COL9A2)
Proteoglycans [BR:
ccad00535
]
Extracellular matrix (ECM) proteoglycans
Others
122437161 (COL9A2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122437161
NCBI-ProteinID:
XP_043317698
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Position
2:100390506..100405993
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AA seq
688 aa
AA seq
DB search
MAPAAAPRNLLVLLQVLGLALAQIRGPPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGPKGEPGKAGTDGPDGKPGIDGLTGAKGEPGPSGIPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGLTGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGRRGLLGDSGRQGKPGPKGDVGVSGEQGIPGPPGPQGIRGYPGMAG
PKGETGPQGYKGMVGSIGAAGSPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGVTG
PPGIDGKDGTPGMPGVKGSAGQAGRPGNPGHQGLAGVPGMPGTKGGPGDKGEPGRQGFPG
VSGPPGKEGEPGPRGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGPPGPRGLVGDRGLPGQPGRQGVAGRDASDQHIEDVVLKMLQEQLAEMA
VSAKREALGATGMMGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRG
EKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGRPGLPGPMGLP
GFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcggccgccccccgcaacctcctggttctcctgcaggtgctggggctcgcc
ctggcgcagatcagaggtccgccaggagagccggggcctccgggtcccccagggccaccg
ggagtgcctggatccgacggaatcgacggtgacaaagggccccctgggaaagctggccct
ccgggacctaagggagagcctggcaaagcggggacagatggaccagatgggaagcccggg
attgatggtctaactggagccaagggtgagcccggtccctcagggatccctggagtcaag
ggccagcctgggctcccagggccccccggcctgccaggccctggctttgctggacctcct
ggaccacctggacctgtcggcctcccgggtgagattggactcacaggccccaagggggat
cctggaccagaaggaccatcagggcccccaggaccccctgggaaaccgggtcgccctgga
accattcagggcctggaaggcagcgcggatttcctgtgtccaaccaactgtccagcgggc
gtgaaagggcccccagggctgcagggcgtgaaggggcatccaggcagacgcgggcttctg
ggagattccggccgccaggggaagccgggtcccaagggagatgtgggtgtctctggagag
caaggcatccctggaccaccgggtccccagggcatcaggggctatccaggcatggcggga
cccaaaggagagacaggccctcaggggtacaaaggcatggtgggctccatcggcgctgct
gggtcacctggtgaggaaggtccacggggaccaccgggccgagctggagagaagggtgat
gtggggagccaaggagttcgaggaccccagggaataacaggcccaaaaggagtaaccgga
cccccaggcattgacggcaaggacgggaccccaggcatgcctggagtgaagggcagtgca
ggacaggcggggcggccgggaaacccaggccaccagggcctagcgggagtgcctggtatg
cctgggacaaaaggaggccctggagacaagggtgagccgggcaggcagggcttccctgga
gtctctggtccccccgggaaggagggagagccagggcctcgaggagaaatcggtccccag
ggcatcatggggcagaagggtgaccatggtgagagggggccagtggggcagccaggccct
caaggccggcagggccccaaaggggaacagggtccccctggaattccagggccccaaggc
ttgccaggcatcaagggagacaagggctccccagggaagaccgggccccgcggtggagtg
ggcgacccgggggtggctggcctcccaggagaaaaaggcgagaagggagagtcgggcgaa
ccaggacccaagggacagcaaggagtccgcggagaacctggctaccctggccccagcgga
gatgcgggcgccccgggggtgcagggctatccggggccccctggccctcgaggactggtt
ggagaccgaggcttgcccggacagcccgggaggcagggcgtggcgggccgagatgccagt
gaccagcacatcgaggacgtggttctgaagatgctgcaagagcaactggcagaaatggct
gtgagtgccaagcgggaggccctgggtgcgactgggatgatgggtcccccaggaccccct
gggcctcctgggtacccaggcaaacagggaccccatgggcaccctggccctcggggcatt
cctggcatcgtgggagccgtgggtcagattggcaacaccgggcccaagggaaaacgtgga
gagaagggcgatcagggagaagttggccgcgggcaccccgggatgcctgggccccccggg
atcccaggactgcctggccggcctggtcaggcaatcaacggcaaagacggagatcgaggg
gctccaggggccccaggagaggcaggtcgacctggcctgccaggccccatggggctgcca
ggcttctgtgagcctgcggcctgccttggagcctcagcctacgcctctgcacgcctcacg
gagcctggatccatcaaggggccatga
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