Cervus canadensis (wapiti): 122448181
Help
Entry
122448181 CDS
T07554
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04151
PI3K-Akt signaling pathway
ccad04510
Focal adhesion
ccad04512
ECM-receptor interaction
ccad04820
Cytoskeleton in muscle cells
ccad04974
Protein digestion and absorption
ccad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122448181 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122448181 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122448181 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122448181 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122448181 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122448181 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccad00535
]
122448181 (COL9A3)
Proteoglycans [BR:
ccad00535
]
Extracellular matrix (ECM) proteoglycans
Others
122448181 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122448181
NCBI-ProteinID:
XP_043335218
LinkDB
All DBs
Position
10:complement(53517904..53536756)
Genome browser
AA seq
728 aa
AA seq
DB search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NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggggggcttgtgcgagggccggcggggcgggaactggcgtctggccggcccaccacca
gccccgcccgccgagcacagctcgaggcccctgcctccgcccgccagctcctctcagagt
gcgagtgcagccatggccggagcccccaccctggccctgctgctgctggggcagctgctg
gccgccactgtaaccttgaccgaggcacagaaagtgggacctcgaggcccgcccggtccc
caagggccacctgggaagccaggcaaggatggcattgatggagaagttggtcctcctggt
ctgcctgggcccgcgggaccaaaaggggccccagggaagccggggaaaccgggagaggcc
gggctgcctggactgcctggagtggatggtctgaatgggcaggatggacctcctggaccc
aagggcgctcctggagaacggggaagtctgggacccccagggccacctgggctggggggc
aaaggcctccctggaccccctggagaggcaggggtgagcggcctaccaggtggaattggc
ctccggggccccccgggaccctcaggactcccaggcctccctggccccccgggacctcct
ggcccccctggtcacccaggggtccttcccgaaggtgctactgatcttcagtgcccagcc
atttgcccaccaggccccccagggcccccaggaatgccagggttcaagggacccaccggc
tacaaaggggagcccggagaagtcggcaaggatggcgaaaagggtgaccccggcccccct
ggaccccctggtatcccgggcaccgtggggttgcagggtccacggggcctacgaggactt
ccagggccactcggaccccccggggaccggggtcccatcgggttccgagggccccccggg
atcccaggagcccctgggaaagcgggcgacagaggagagaggggcccagaggggttccgc
ggccccaagggcgaccttggcaggcctggtcctaaaggcgtccccggcatgtctgggcct
ggtggagagccgggcatgccaggcaaggatggcagggatggcctgccaggactcgatggc
gaaaagggagaagctggtcgccatggcgcccctggagagaaggggcccaacgggctgccg
ggtctccccggacgagcagggtccaagggtgagaaaggagaactgggtagacctggagag
ctgggcgaggccggcccctcaggagagcctggtgtccctggagatgttggcatgcccggc
gagcgtggagaggctggacacaggggctcagcgggggctctgggcccacaaggcccccct
ggggcccctggcgtccgtggcttccagggccggaagggcagcataggagaccctggcctg
ccgggcccccaaggcctccgaggtggcgtcggcgaccggggcccgggaggagcttccggc
cccaagggtgaccagggcatcgcgggtgctgacggccttcctggggataaaggagaactg
ggtcccagcggccctgttggccccaaaggagagtccggcagtcgcggggagctgggccct
aagggcatccagggccccaatggcaccagcggcgtagatggcgtccctggcccccctggc
cccgtgggcctccagggtgtgcgaggcgtgcccggcatcactggaaaacctggggtcccg
gggaaagaagccagcgagcaacacatcagggagctgtgtggggggctggtcagcgagcaa
atcgcgcagctagccgcgcacctgaggaagcccctagcaccgggctccatcgggcgacca
ggtcctgctggtcccccaggcccccccggccccccaggctccattggtcaccccggggct
cgagggccccctggataccgaggtcccacaggagaacttggagaccctggacccagagga
aaccagggtgacagaggagacaaaggctcggctggcgagggcctggatgggcctgatgga
gaccaagggctgcaaggaccgcaaggtgtacccggcgtcggcaaagacggccgagatgga
gctcacggcgagcctgggctccccggtgatcctggccttcctggtgccgttggcgctcag
gggcctcctggcatctgcgatacctccgcctgccaaggagccgtgatggcagctgttggg
gagaagtcaggtccccggagctcctaa
DBGET
integrated database retrieval system