KEGG   Cervus canadensis (wapiti): 122448181
Entry
122448181         CDS       T07554                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04151  PI3K-Akt signaling pathway
ccad04510  Focal adhesion
ccad04512  ECM-receptor interaction
ccad04820  Cytoskeleton in muscle cells
ccad04974  Protein digestion and absorption
ccad05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    122448181 (COL9A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122448181 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122448181 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122448181 (COL9A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    122448181 (COL9A3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    122448181 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ccad00535]
    122448181 (COL9A3)
Proteoglycans [BR:ccad00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   122448181 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 122448181
NCBI-ProteinID: XP_043335218
LinkDB
Position
10:complement(53517904..53536756)
AA seq 728 aa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NT seq 2187 nt   +upstreamnt  +downstreamnt
atggggggcttgtgcgagggccggcggggcgggaactggcgtctggccggcccaccacca
gccccgcccgccgagcacagctcgaggcccctgcctccgcccgccagctcctctcagagt
gcgagtgcagccatggccggagcccccaccctggccctgctgctgctggggcagctgctg
gccgccactgtaaccttgaccgaggcacagaaagtgggacctcgaggcccgcccggtccc
caagggccacctgggaagccaggcaaggatggcattgatggagaagttggtcctcctggt
ctgcctgggcccgcgggaccaaaaggggccccagggaagccggggaaaccgggagaggcc
gggctgcctggactgcctggagtggatggtctgaatgggcaggatggacctcctggaccc
aagggcgctcctggagaacggggaagtctgggacccccagggccacctgggctggggggc
aaaggcctccctggaccccctggagaggcaggggtgagcggcctaccaggtggaattggc
ctccggggccccccgggaccctcaggactcccaggcctccctggccccccgggacctcct
ggcccccctggtcacccaggggtccttcccgaaggtgctactgatcttcagtgcccagcc
atttgcccaccaggccccccagggcccccaggaatgccagggttcaagggacccaccggc
tacaaaggggagcccggagaagtcggcaaggatggcgaaaagggtgaccccggcccccct
ggaccccctggtatcccgggcaccgtggggttgcagggtccacggggcctacgaggactt
ccagggccactcggaccccccggggaccggggtcccatcgggttccgagggccccccggg
atcccaggagcccctgggaaagcgggcgacagaggagagaggggcccagaggggttccgc
ggccccaagggcgaccttggcaggcctggtcctaaaggcgtccccggcatgtctgggcct
ggtggagagccgggcatgccaggcaaggatggcagggatggcctgccaggactcgatggc
gaaaagggagaagctggtcgccatggcgcccctggagagaaggggcccaacgggctgccg
ggtctccccggacgagcagggtccaagggtgagaaaggagaactgggtagacctggagag
ctgggcgaggccggcccctcaggagagcctggtgtccctggagatgttggcatgcccggc
gagcgtggagaggctggacacaggggctcagcgggggctctgggcccacaaggcccccct
ggggcccctggcgtccgtggcttccagggccggaagggcagcataggagaccctggcctg
ccgggcccccaaggcctccgaggtggcgtcggcgaccggggcccgggaggagcttccggc
cccaagggtgaccagggcatcgcgggtgctgacggccttcctggggataaaggagaactg
ggtcccagcggccctgttggccccaaaggagagtccggcagtcgcggggagctgggccct
aagggcatccagggccccaatggcaccagcggcgtagatggcgtccctggcccccctggc
cccgtgggcctccagggtgtgcgaggcgtgcccggcatcactggaaaacctggggtcccg
gggaaagaagccagcgagcaacacatcagggagctgtgtggggggctggtcagcgagcaa
atcgcgcagctagccgcgcacctgaggaagcccctagcaccgggctccatcgggcgacca
ggtcctgctggtcccccaggcccccccggccccccaggctccattggtcaccccggggct
cgagggccccctggataccgaggtcccacaggagaacttggagaccctggacccagagga
aaccagggtgacagaggagacaaaggctcggctggcgagggcctggatgggcctgatgga
gaccaagggctgcaaggaccgcaaggtgtacccggcgtcggcaaagacggccgagatgga
gctcacggcgagcctgggctccccggtgatcctggccttcctggtgccgttggcgctcag
gggcctcctggcatctgcgatacctccgcctgccaaggagccgtgatggcagctgttggg
gagaagtcaggtccccggagctcctaa

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