Cervus canadensis (wapiti): 122453888
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Entry
122453888 CDS
T07554
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
122453888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122453888
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122453888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
FraC
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
122453888
NCBI-ProteinID:
XP_043344131
LinkDB
All DBs
Position
15:45338082..45476034
Genome browser
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDESGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFELNITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKGHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVHKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSVRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPVNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPSARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGEGTPIKEDILIDKLNENSTPEKTDMTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagccaagagacccaagcaagag
cgcaaggatgaggatgatgaaagtggcccaaagccaaatagtgacttggaagcgggaaaa
tcccttccatttatttatggagacattcctccagagatggtgtcagagccgctggaggat
ctggatccctattatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcgattcagtgccactcctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ctagaagatttcacatttctacgggacccatggaattggttggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaaccttcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccatagtgggggcc
ctaatccagtcggtgaagaagctctcagatgtaatgatcctgactgtgttctgcctgagc
gtgtttgcactaataggattacagctatttatgggcaacctgcgaaacaaatgtttgcaa
tggcccccagataattcttcctttgaactaaacatcacttccttctttaataactcattg
gatggaaacggtaccactttcaataggacagtgagcatgtttaattgggatgaatatatt
gaagataaaggtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctctgatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaacccc
aactatggctacacaagcttcgacacctttagctgggctttcctatccttatttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctccttctatctaataaatttgatc
ctggctgtggtggccatggcctatgaagaacagaatcaggcaacgctggaagaggctgaa
cagaaagaagctgaatttcagcagatgcttgaacagcttaaaaagcaacaagaagaagcc
caggcagcagctgcagcagcttcggctgaatcaagagacttcagtggtgctggtgggatc
ggggttttctcagagagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacagaaggaagaagaagaaacagaaagaacagtctggagaagaagaaaaggaa
gatggggtccacaaatctgaatctgaagacagcataagaagaaaaggtttccggttttcc
ttagaaggaagcaggctgacatatgaaaagaggttttcctctccacatcagtctttactg
agcgtccgtggctccctgttctctccaagacgcaacagtagggcgagccttttcagcttc
cgaggccgagccaaggatatcggctccgagaatgattttgcggatgatgaacacagcacc
tttgaggacaacgacagcagaagagactctctgtttgtgccgcacagacacggggagcgg
cgccacagcaacgtcagccaggccagccgcgcctccagggtgctccccatcctgcccgtg
aacgggaagatgcacagcgccgtggactgcaacggcgtggtctccctggtcgggggccct
tctgccctcacgtctcctgctgggcagctcctaccagagggcacaactactgaaacagaa
ataagaaagagacggtccagttcttatcacgtttccatggatcttttggaagatccttca
gcaaggcaaagagcaatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccgtgctggtataaatttgctaacatgtgtttgatttgg
gactgctgtaagccatggttaaaggtgaaacatgttgtcaacctggttgtgatggaccct
tttgttgacctggccatcaccatctgcattgttctaaacaccctcttcatggccatggag
cactatcccatgacggagcagtttagcagtgtgctatcagttgggaatctggtcttcact
gggatcttcacagcagaaatgtttctcaagataattgccatggatccatattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggactgtcagttctccgatcatttcgactgcttagagttttcaag
ttggcaaaatcctggcccaccctgaatatgctaattaaaatcatcggcaattctgtaggg
gctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctccctcgctggcacatgcatgacttcttccactccttcctgattgtgttccgggtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttcctg
gccttactcttgagttcattcagttctgacaatcttgccgccactgatgatgataatgaa
atgaataatctccagattgctgtgggaaggatgcagaaaggaatcgattttgttaaaaga
aaaatacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatc
aaacctcttgaagatctcaataacaaaaaagacagctgcatttccaaccataccaccata
gaaataggcaaagacctcaattatctcaaagatggcaacggaactaccagtggcataggc
agcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtccttcataaacaacccc
agcctcactgtgactgtaccaattgctgtcggagagtctgactttgaaaatttaaatact
gaagaattcagcagcgagtcagatatggaagaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggagaacaacctgaagct
gagcctgaagaatctctggagcctgaagcctgttttacagaagactgtgtgcggaaattt
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacttgagaaaa
acttgctataagatagtggagcataactggttcgaaaccttcattgtcttcatgattctg
gtcagcagtggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttatatattcatcctggaaatgcttctc
aagtgggttgcctatggctttcaagtgtattttaccaatgcctggtgctggctagatttc
ctgatcgtcgatgtctcattggttagcttaactgcaaatgctttgggatactcagaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccactgagagccttatcccgg
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtctgcctgatcttttggttgatattcagtatcatgggggtgaatcttttt
gctggcaagttttatcactgtattaactacaccactggagagatgtttgatgtcagcgtg
gtcaacaactacagcgaatgtaaggccctcatagatagcaaccaaactgcccgttggaag
aacgtgaaggtcaactttgataatgtgggacttgggtatctttctctgcttcaggtagcc
acatttaagggatggatggatattatgtatgcagcagttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctgtattttgtcatctttatcattttt
ggttcattctttactctaaatcttttcattggtgtcatcatagataacttcaaccagcag
aaaaaaaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaattgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaagggatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
cttatctgcctcaacatggtcaccatgatggtggagactgatgaccagagtcaagaaatg
accaacattctgtactggattaatctggtgtttattgttctgttcactggagaatgtgtg
ctgaaactgatctctcttcgttattactatttcaccatcggatggaatatttttgatttt
gtggtggttattctctccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccttgttccgagtgatccgtcttgccaggattggccgaatcctgcgtctg
atcaaaggggctaaggggatccgcacactgctctttgccttgatgatgtcccttcctgcg
ctgtttaacataggtctcctgctctttctggttatgttcatctatgccatctttggaatg
tccaactttgcgtatgttaagagggaggttggaattgacgacatgttcaactttgagacc
tttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggatggattg
ctagcacctatcctcaacagtggacctccagactgtgaccctgaaaaagatcaccctggc
agctcagttaagggagactgtgggaacccgtctgttgggattttcttcttcgtcagttac
atcatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctggagaacttc
agtgttgctactgaagaaagcgcagagcccctgagtgaagatgactttgagatgttctac
gaggtttgggagaagtttgatcctgacgccacccagttcatagagttctccaagctctct
gattttgcagcggccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggggacaggatccactgcctcgacatcttattt
gcctttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatccagatg
gaagaaagattcatggcatcgaacccctccaaagtctcgtatgagcccattacaaccact
ctgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaagtttcatgtatatataagaaagacaaaggcaaggaa
ggggagggaacacccatcaaagaagatatcctcattgataaactaaatgagaattcaact
ccagagaaaaccgacatgaccccttccaccacgtctccaccttcttatgacagtgtgacc
aaacccgagaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtag
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