Cyanistes caeruleus (blue tit): 111927358
Help
Entry
111927358 CDS
T05602
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111927358 (HMBOX1)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111927358 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_37
HTH_26
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
111927358
NCBI-ProteinID:
XP_023779963
UniProt:
A0A8C0ZI45
LinkDB
All DBs
Position
3
AA seq
455 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSGYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTSHSDHQ
DPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacagacgagcca
agattcaccatagagcagatcgacctcctgcagcgcctgagacgcacgggaatgaccagg
catgagatcctgcacgccctggaaaccttggaccgtcttgaccaagagcatagcgacaaa
ttcgggagaaggtctggctacggaggcggctcctacagcaacagcaccaacaacgtcccg
gcgtcttcctcgacggccacggcttccacgcagacccagcactccgggatgtccccatcc
ccaagcaacagttacgacacctccccacagccttgcactacgaatcagaacgggagggag
agtaacgagaggttgtctgccttcaacgggaagatgtcacccacccgctaccccctggcc
aacagcctggcccagaggtcctacagcttcgaggcttccgaggaggacttggacatcgac
gacaaagtggaggagctgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctcgccaaccggagaatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcccattggctgttgcagcaggggtcggacctgagtgaacagaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacactaagcatgaga
cccgctcccatcccaatagaagagccagaatggagacagacgcctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacgtggagaaaggagtgcctg
gctgttatggagagttacttcaatgagaatcaatatcccgacgaggcaaagagagaagaa
attgccaacgcctgtaacgcagttatacagaaaccaggtaaaaagttgtcggatttggag
cgagttacctccctcaaagtgtacaactggtttgccaacaggaggaaggagatcaagaga
agagccaatatcgaagcagcaatcctggagagccatggaatagatgtacagagtccagga
ggtcattccaacagcgacgacgtggacggcaacgattactcggagcaggacacttggcaa
gtccgcaacggggaggaggagggacgatgttccgagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagatgacagcactagccatagtgaccaccaa
gaccccatttccttagccgtggagatggcagcagtcaaccacaccatcctggcgctggcc
cggcaaggagccaacgagatcaagacagaggctctggacgacgactga
DBGET
integrated database retrieval system
