Cyanistes caeruleus (blue tit): 111928075
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Entry
111928075 CDS
T05602
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccae04990
]
111928075 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
ccae04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
111928075 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
111928075
NCBI-ProteinID:
XP_023781070
LinkDB
All DBs
Position
4
AA seq
1578 aa
AA seq
DB search
MRKETEDIESPKRSIRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPD
VVLRGSSDGRGSDSETDLPHRKMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFY
VPAPLRKKKAEREEYRKSWSTATSPLGDRPFSKPHPETIEEELNETSGLCEKEKVGSVAP
EASSLKNQLGVSQSEENSTDQPPSCSAKEASAPKGKDVEEIRKLRRLEQAGIKVMSAAQR
YGSKKPICEDSGSTPDIILRKDNPFMTHYQGKDSGSEDEAASRVPDLEKDDFATRRARMN
QPKHVAPFNSFLVGPYTSKEKGKLEDVKKPLQMEKKEHARRRRVHVTSVRQIVTNKENSL
LQNKKTESEEEQQVKELDNERDDLAKRKSQSILPQLQEDVLFVNASITKADLETWKRLKV
SGESSEEDFRCSSNTLPPTDITVKAVAQDDFAVRKTRANKKAGSPRQKFVHFGPVTEIDQ
QKWDKLVIGRASSKSGTEEENKKDGVESLSGAESSPSTTAVSLGSAEHGSEVSEPENESS
EGGVKSGTNNSCRIPSPVPASVISEEQTPWSLNKQQENTKEECDRNLPDIERDDMLVRRM
GTFPRRTTSSIPINCPPLSIAPYLLQQQQQEEAVAREKDLKTLQDGESIVTKEESHEQLE
IPQLQSDGTENNVKFPDPQRDDMLARRTGAFLKQPGPNVKQFLPMPFSKQQNKQGTATEL
EKKTTRPEKCPQVYSNSSGKPAIEPPQEQPQGQKDSLPPTGQDEIISTAKVAEDDHNEVH
LGQTSKLQAVPEENKMETLSSKDEHLQTFGPRTAVSDDAESMSMFDMRCEEEAVAQPHSK
ARHEKLQNIHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLAGDGTNER
RKSIKTYREIVEEKERRERELHEAYKNAKTPEEAESILQQYTERFTISEAVLERLQMPKI
LERSHSVEPNSPLKDPNPLRYLRQQSLPAPKFTATIEATIVPTTELEPRSSTGRTSPSKS
VSKAVPMLTPKPYSQPKNTQEVLKNFKVDGKVSMNGENVNGMEEKDKECTTVIFTPSPTR
SLKFDGVARGDRPPVELKKDPPSVELSSQRPATQSVHKEPTASPVELDGADSLQAEPSPS
GAAPALPECPSPDQKQFNSTAACASSAVKRLEFLPSPIPSEETASSKKDVKKAEIEKQKE
AELPPTQEVIKAKALEEKGSVVLPFLKKLPETSQVTLHNSGLQADCDTGDKSNRFNFWAW
DPEEERKRQERWQHEQERLLQEKYQKEQYKLKEEWEKAQREVEEEERRYYEEERKIIEDT
LVPFIVSSNSAELLSSSSSTTEGNKTVNSTDSNSCPGEGKQKEVTKQKKLLWEHDSMSSL
KSKESELWQEKRSGNKVLSGYPETGILKGGSEQEHHMPMMERSSPARLNLPLTQDENVSW
NPQLLTKRSPQCAEDIRQRPFLGQQPSSAGEARRAGYHENFRSGPSSPCSPAALSQSPNR
SVSGKKLCSTCGLPLGKGAAMIIETLGLYFHIQCFRCGVCKGQLGDAASGTDVRIRNGLL
NCNDCYIRSRTAGQPTTL
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaaacagaggatattgagagccccaagcgcagcattcgtgacagcggctat
atagactgctgggactcggagcgcagtgattccctctccccgcctcgccacggcagagat
gattcctttgacagcctggactcctttggctcccgctcgcagcagacaccgtctccagat
gtagtgctcagagggagcagtgatgggagaggaagtgactcggaaactgacctgccacac
agaaagatgccagatgtgaaaaaagatgatatgttggcgaggcggacctcacacggtgaa
cctaaatcagctgtgccttttaaccagtacctcccaaacaagagtaaccagactttctat
gtacctgccccgcttcggaaaaagaaagctgaacgggaggaataccggaagagctggagc
acagcgacttcacctctaggagacagacctttcagcaaaccccaccctgaaaccatagaa
gaagaactgaatgaaacatcaggactgtgtgaaaaggagaaagtgggctccgtggctcct
gaagcaagctcccttaaaaatcagttaggtgtgagtcaaagtgaagaaaactccacagac
cagcctccttcatgtagcgcaaaggaagcatcagcaccaaaggggaaagatgtggaggag
atcagaaagttaagaagacttgaacaagctggtattaaggtcatgtcagcagcccagcgc
tacggcagtaaaaagccaatatgtgaagacagcggaagcaccccagacattattcttcgc
aaggacaaccccttcatgacacattatcaaggaaaggattctggttcagaagatgaagca
gccagcagagttcctgatttagaaaaggatgactttgccacacggagagccagaatgaat
caacccaaacacgtagctccatttaactcctttttagttggaccctatacaagtaaagag
aaaggtaaactggaagatgttaaaaagccattgcagatggaaaaaaaggaacatgcaaga
agaagacgggtgcacgtgacatcagtaaggcaaatagttacaaacaaagagaactcactt
ctgcaaaataagaagactgagtcagaggaggaacagcaggtgaaagagcttgataatgag
agagatgatttggcgaaacggaaatctcaaagcatccttcctcagctacaagaagatgtg
ctttttgtcaatgcttctataacaaaagcagatctggagacctggaaaagattgaaagtg
tcaggggagtccagtgaagaagatttcagatgttccagcaacactttgccaccgactgat
atcacggtgaaagcggtagcccaggatgattttgctgtccgcaaaaccagagcaaacaaa
aaggctggtagccccaggcagaagtttgtgcattttgggccagttactgagattgatcaa
cagaaatgggacaagctcgttattggcagagcttcatccaagagtggaacagaagaggaa
aacaagaaagacggtgtggagagtctctctggtgctgaaagctctccttcaaccactgct
gtcagtcttgggtctgctgaacatggcagtgaagtatctgagccagaaaatgagtccagt
gagggaggagtcaagtcaggtaccaacaactcttgcagaattccatcacctgtaccagct
tctgtcatctctgaggaacaaaccccatggagtttaaacaaacagcaagaaaacaccaag
gaagaatgtgacaggaatttaccagatattgagagagatgatatgttggttagaaggatg
ggaacttttccaaggcgtaccacaagctctattcccataaattgtcctcctctgtcaata
gctccttatctgctgcagcagcagcagcaagaggaggctgtagctcgtgaaaaggatttg
aagactctgcaggatggagaaagtattgtcacaaaagaagagagccatgaacagcttgaa
atccctcagctgcagagtgatgggacagaaaacaacgtgaaatttccagacccacaaaga
gatgacatgttagccagaagaactggagcttttcttaaacagcctgggcccaatgttaag
cagttcctgcccatgccattttcaaagcagcagaataagcagggcacagctacagaactt
gagaagaaaaccacgaggcctgaaaaatgtccacaagtctactctaatagctctggaaaa
cctgcaatagaaccaccgcaagaacagccacaagggcagaaggacagtctcccacctaca
ggacaagatgagattattagtactgccaaagtggctgaagatgaccacaatgaagtccac
cttggtcaaacatctaagcttcaggcggttcctgaggaaaacaaaatggaaacactttca
tccaaggatgagcatctgcaaacattcggccccagaactgctgtgtctgatgacgcagag
agtatgagtatgtttgacatgagatgtgaagaagaagctgtagctcagcctcatagcaaa
gctcgccatgagaagctgcagaacatacacaaccagctgaaagaggacgagaccagatgg
caagatgacctggctcggtggaagagtcgtcgaaggagtgcttcacaggatttaattaaa
aaggaagctgagaggaagaaaatggagaggttattggctggagacggcacgaatgagcgc
agaaaaagcatcaaaacctaccgagaaatcgtggaggagaaagagagaagggagcgggag
cttcatgaggcgtacaagaatgcaaagacaccagaggaggctgagagcatcctccagcag
tacactgaaagattcactatcagtgaagctgtccttgagcgtttgcagatgccaaaaatc
ctggaaagaagccattcagtggaaccaaattccccactgaaagacccaaatcctctgaga
tatttaagacagcagtcacttcctgctccaaaattcactgccacaattgaagcaaccatt
gttcccaccactgaactagagcccagaagttcaacaggacgcacatctcccagcaaaagt
gtctccaaggctgtgcctatgctgacacccaagccttactcacaacccaaaaacacacag
gaagttttaaagaactttaaggtagatggaaaagtcagcatgaatggagaaaatgtcaac
ggcatggaagaaaaggataaagaatgtacaacagtaatatttactccttcaccaaccaga
tctctgaaatttgatggagtagccagaggggacaggcccccagtagagttgaagaaggac
cccccaagtgttgagctcagttcacagaggcctgccactcagagtgtgcacaaagagcca
acagcctccccggtggaactggatggagctgacagcctgcaagccgagcccagccccagc
ggtgcggcacctgctctgccggagtgcccatccccagatcaaaagcaattcaactcaact
gcagcttgtgccagctctgctgtgaagagattagaatttcttcccagtcctatcccttca
gaggaaactgcttcaagcaagaaagatgtgaagaaagctgaaatagagaagcagaaggaa
gcagagctccctcctacacaggaggtgattaaagcaaaagccctggaagaaaaggggagt
gtagtcctgccatttttaaagaaactacctgaaaccagccaagttactctgcataactct
ggtctacaagctgattgtgatactggtgataaatcaaatcgtttcaatttttgggcctgg
gatccagaagaagagcgaaagcgccaggaaaggtggcagcatgagcaagaacgcttgctt
caggagaagtatcagaaggagcagtacaagctgaaagaggaatgggagaaggcccagaga
gaagttgaagaggaggaacgtagatactatgaggaggaacgcaagataattgaggatact
ctagttccattcattgtttcttctaactctgctgagctcctctcctcttcttcctctacc
actgaaggaaacaagacagtgaactcaactgattcaaacagctgtccaggggagggcaaa
caaaaagaagttacaaagcagaaaaagctgctctgggagcatgacagtatgtcatctctg
aaaagcaaggaaagcgaactctggcaagaaaagaggagtggaaataaagtgctctcagga
tacccagagactggtatcttgaaaggaggaagtgagcaggagcaccacatgccaatgatg
gagcgcagctcacctgccagactgaatctgccactgactcaggatgagaatgtctcctgg
aatccacagctgctgacaaagcgatccccacagtgcgcagaggacattcggcagagacca
ttcctgggccagcaaccaagctccgcaggggaagcaagaagggcaggctatcatgagaac
ttccgatctgggccgtcgtctccctgctctcctgctgctctgagtcagtcacccaacagg
tctgtcagtgggaagaagctttgttctacctgtggtctccctctaggaaaaggagctgcc
atgattattgaaacactcggtctttatttccatattcagtgcttcaggtgtggcgtttgc
aaaggacagctgggagatgcagcaagtggcacagatgtcaggattagaaatggtcttctc
aactgcaatgattgttatatccgatccagaactgctggacagccaactacattgtga
DBGET
integrated database retrieval system
