Cyanistes caeruleus (blue tit): 111929667
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Entry
111929667 CDS
T05602
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111929667 (SAMD4A)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111929667 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
111929667
NCBI-ProteinID:
XP_023783043
UniProt:
A0A8C0U5R4
LinkDB
All DBs
Position
5
AA seq
732 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGGQGRGRSDSLDYGQAHYYHQR
QNSDDKLNGWQNSRDSGISVSASSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTIL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLEGDILEGGNLRVPLQELHQMILTPIKAYSC
QNSSTEEHGRDVDSHHPSSLLGSDSQGSECKDSAGAGMQQHHLPGCEGESGGAPLPEGDL
PGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTELQKKRLLSWKQQVQKLF
RSFPRKSLLELSGYRQQRSRGFGQSNSLPTAGSAGAGLARRNPRQFQIPSRNLPTARLGL
LGPTGLLGTPQRSPAASPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHTSPQ
TMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALSGEHSLLLGLFQHVHAASAEPPSTC
PLPPKSWDRLWL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggttggcgtgctggccgggtggttcaagggctggaacgagtgc
gagcagactgttgcgctgctctccctgctcaaacgcgtcagccggacccaggctcgcttc
ctccagctctgcctcgagcattccctggcagactgcaccgagctccacatcctcgaaggg
gaggccaacaaccccggaatcattaaccagtggcaacaggaatccaaggataaagtgatc
tccctcttgttaacccacctgcctttactgaagcccggcaacatcgaggcgaaagtcgag
tacatgaaactcttgcccaaaatcctggcgcactccatcgagcacaaccagcacatcgag
gagagcaggcagctgctgtcctacgccttgatccaccctgccacctccctggaggacagg
agcgccctggccatgtggctcaaccacctggaggaccgcacgtcggggggcttcggcggg
cagggccggggccgctcggactcgctggactacgggcaggctcactactatcaccaaaga
cagaattctgacgacaaactcaacgggtggcagaactctcgggactccggcatcagcgtc
agtgcctccagctggcaggacaaaaacctggcctgtgagaacggccacctgcccctctac
tcctcctcctccgtccccaccaccatcaacaccatcggcactagcacaagcaccattctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttccgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttccgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccagcctggctgaagagcctccggctgcacaagtac
gctgccctcttctcccagatgacgtacgaggagatgatggccctcaccgaatgccagctc
gaggcacaaaatgttaccaaaggcgcgagacacaaaatagtcatcagtatccaaaagcta
aaagaaagacaaaacctgctcaaatctctagaaggggacatcctggaaggcggcaacttg
cgtgtcccgctgcaggagctgcaccaaatgatcctcacccccatcaaagcctactcttgc
caaaactcgagcacggaggagcacggccgggacgtggactcgcaccacccctcctccctg
ctgggctcggacagccaaggctcggagtgcaaggactcggcgggggccgggatgcagcag
catcacctgccggggtgcgagggcgagtccgggggggcccctttgcccgagggtgacctg
cctggccagttcacccgagtgatggggaaagtctgcacacaacttttagtttcccgaccc
gatgaagagaatataagttcctatttacagctcatagacaaatgtctaatccatgaggcg
tttacagagctccagaagaagcggctgctgtcatggaaacagcaggtgcagaaactcttt
cggtctttccctcggaaatccctcctggagctgtcaggctatcggcagcagaggagccga
ggctttggccagtccaactcgctcccgacagccggatccgcgggggcagggctggcacgg
aggaacccccggcagttccagatcccctcccgcaacctccccacggcccggctggggctg
ctgggccccacggggctgctgggcaccccccagcgcagccctgccgccagccccgccatc
ctcaagcaaggcagacagaacctgtggtttgccaaccctgggggcagtaacagcatgccc
agccggagccacagctcggtgcagaggacgcgctcgctgccggtccacacgtccccgcag
accatgctgatgtttcagcagccagagttccaggtgccggtgactgaacctgacatcaac
aacaggctggagtccctgtgcctgagcatgacggagcacgcactcagcggtgagcattcc
ctcctcctggggctcttccagcacgtccacgccgcctctgctgagccccccagcacctgc
cccctgccccccaaaagctgggacaggctgtggctgtga
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