Cyanistes caeruleus (blue tit): 111933674
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Entry
111933674 CDS
T05602
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04136
Autophagy - other
ccae04140
Autophagy - animal
ccae04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111933674 (ATG16L1)
04136 Autophagy - other
111933674 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111933674 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccae04131
]
111933674 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
ccae03029
]
111933674 (ATG16L1)
Membrane trafficking [BR:
ccae04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
111933674 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
111933674 (ATG16L1)
Mitochondrial biogenesis [BR:
ccae03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111933674 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Ge1_WD40
INO80F
HTH_6
WD40_like
Lipoprotein_6
PALB2_WD40
Peptidase_M15_4
HEF_HK
WH_CYT4
Fez1
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
111933674
NCBI-ProteinID:
XP_023789110
UniProt:
A0A8C0VEH3
LinkDB
All DBs
Position
9
AA seq
624 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDSTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDD
IEVLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDTA
RRRSMSSFPAPQDTAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRTESIVKELELLGRITALDLNPERTELLTCSRDDLLKIIDLRVSAVK
QTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAV
TWSPAGAHVVTVDKGNKAVLWSEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgctgccggcttccccccctggaagcggcacatcgcggaggag
ctgcggcggcgggaccggttgcagcggcaggctttcgaggagatcatcgcccagtataac
aagctactggaaaagtcagaccttcatgcagtgctggctgataagcttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagcccaggacatgatagcacatggaatgacgct
cagctgcaagaactggcccagctgaagataaagcaccaagaggagctgactgagctgcac
aagaaacgtggagagctggcccagtctgtaatcgatctgaacaaccaaatgcagcagaaa
gacaaagagatgcagatgaacgaagccaagattgcagagtatttgcaaaagatttctgaa
ctggaaacagagtgccaagaattgcgtagcaaactgcaggatcttgagcgagctaatcag
acactgaaagacgaatatgacgctctccagatcaccttcaatgccttggaggagaagtta
aggaaaactactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcaaggagacgccaggccaggctg
cagaaggagctggcagaagctgccaaagagcccttgcctgttgagcccagggatgatgat
atcgaagtgcttgcagatgaaacctctgacacagctgaggaaacctctccagtgcgagct
gtcagccggacgtccagtaagcgactctcccagccagctggaggccttctggactctatc
actaatatctttggtctgtctgagtctccccttttgggacatcagtcttctgatactgcc
aggaggcgttctatgtcctcattccctgcaccccaggatactgcagagccacatccaggt
gccagtaaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggg
gaggtgaatgcggtgcagttcagccctggctcccggttactagcaacaggaggcatggac
cggagggttaagctttgggaagtcttgggagataggtgtgaacccaaaggttccctctct
ggtagtaatgctgggattacaagcatagaatttgatagtgctggttcttacctcttagca
gcttcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcacacc
ctgacaggtcacagtggtaaagttctgtcagccaagttcttgctggacaatgcacgtatt
gtttcgggaagtcacgaccggaccctcaagctctgggatctccgcagcaaagtttgtata
aaaacagtttttgcaggatctagttgcaatgacatcgtatgcactgagcagtgtgtaatg
agtggacattttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaa
gaactggagttgcttggaagaatcacggctctggacctgaatccagagcgaacagagctt
ctgacctgttcccgtgatgatctactcaagattattgatctgcgggtcagtgctgtcaag
cagacgttcagtgcccagggattcaaatgtggctctgactggacaagagttgtgttcagc
cctgatggtaactatgtggctgctggctcagctgatggggccctctacatttggaatgtg
cttactgggaaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtc
acgtggtccccagcgggtgcccatgtggtcactgtggacaaaggaaacaaggctgtgctg
tggtctgagttttga
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integrated database retrieval system
