Cyanistes caeruleus (blue tit): 111934204
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Entry
111934204 CDS
T05602
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111934204 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccae03310
]
111934204 (RORA)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111934204 (RORA)
Nuclear receptors [BR:
ccae03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111934204 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
111934204
NCBI-ProteinID:
XP_023789930
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All DBs
Position
10
AA seq
473 aa
AA seq
DB search
MTFGKGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCP
RQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQR
DHQQQPGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPD
QSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQY
LREELQQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQN
DQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSL
CSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKL
ICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacctttggaaaaggtatttctgtaacaaagaagactcatacatctcaaattgaaatt
attccatgcaagatctgtggagacaaatcatcaggaatccattatggtgtcattacatgt
gaaggctgcaagggctttttcagaaggagtcagcagagcaatgccacgtactcgtgtcct
cggcagaagaactgtctgatcgaccggaccagtcggaaccgctgccaacactgtcgctta
cagaaatgccttgctgtggggatgtctcgggatgctgtaaagtttggtcgaatgtcaaaa
aagcagagggacagcctgtacgccgaggtgcagaaacaccgaatgcagcagcagcagcgg
gatcaccagcagcagccaggagaggcagaaccgctcacaccaacatacaatatcaccacc
aatgggttaacagagctacatgacgacctcagtaattacattgatgggcatacccctgaa
ggtagcaaagcagactctgcagttagcagcttctacttagacatacagccttctccagat
cagtcgggtcttgatattaatggaatcaaaccagaaccaatatgtgactacacaccagca
tcgggcttcttcccttattgttcttttacaaatggggagacctctccaactgtgtccatg
gcagaattagaacatcttgcacagaatatttccaagtcacacatggaaacttgccagtac
ttgagagaggagttacagcagataacatggcaaacttttctgcaggaagaaattgagaac
tatcagaacaagcaaagggaggtaatgtggcagttatgcgcagtcaaaataacagaagct
atacagtatgtagtggaatttgccaaacgcattgatggctttatggaactgtgtcaaaat
gatcaaattgtgcttttaaaagcagggtctttagaggttgtgttcatcagaatgtgccgt
gcctttgactcccagaacaacacagtctactttgatggcaagtatgctagcccagaggtt
ttcaagtccttaggttgtgaagacttcattagctttgtgtttgaatttggaaaaagttta
tgttctatgcacctgacagaagatgagatagctttgttctctgcatttgttttaatgtca
gcagatcgctcatggcttcaggagaaagtaaaaattgagaaactccaacagaagatccag
ctagcacttcagcatgtcctacagaagaaccaccgagaagatggaattctaacaaagtta
atatgcaaagtgtctactttaagagcactgtgtggacgacatacagaaaagcttatggca
tttaaagcaatatacccagacattgtgcgacttcattttcctccactttacaaggagttg
ttcacttcagagtttgagccagcaatgcaaattgatgggtaa
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