Cyanistes caeruleus (blue tit): 111940499
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Entry
111940499 CDS
T05602
Symbol
TRIM13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111940499 (TRIM13)
Enzymes [BR:
ccae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111940499 (TRIM13)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111940499 (TRIM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
Herpes_IE2_3
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
111940499
NCBI-ProteinID:
XP_023799018
LinkDB
All DBs
Position
1
AA seq
409 aa
AA seq
DB search
MMELLEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILEGNVRNVLWRPSPFKCPTCRK
ETPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVCAT
RGDHTKHVFCSIEEAYSQEKRAFETLFQGFETWRCGDALSRLDTLETSKRKALQMLTKDS
DKVKEFFEKLQHTLEQKRNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF
KDVSEPIIFLQQMQEFREKIKVLKETPLPCSTVDISPTMKSFDTSQWNGIKLVDVDKLSL
PQESNTFKFKIPSVFSRRFIVNSLIFLLILAVTRMSFVESVIDNLQCWKSQFLTICLSYL
ADTVEIADHAVFYWEQMTDGASLLREKCKNYTLVVLDNVAQFVCKYKLL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctcctagaagaagatctgacctgccccatttgctgtagcctgtttgatgat
cctcgtgtcctgccctgttcacacaatttctgcagaaagtgtctggaaggaattcttgag
ggaaatgtgcgaaacgtgctttggaggccatcccctttcaagtgccccacatgcaggaag
gagactcctgtcactggagtcaacagcttgcaggtcaactattccctgaaaggtatcgtg
gagaagtacaacaaaatcaaagtaactccaaaaatgcctgtgtgcaaagtgcacagcggg
caaccccttaacattttttgccggacagacatgcagctgatctgtggggtttgtgccacc
cgtggcgaccacacaaagcatgttttctgttccattgaggaagcttattcccaggagaag
cgggcttttgaaaccttgtttcagggcttcgaaacctggcgttgcggagatgccctctca
cggctggataccttagagaccagtaagaggaaagctctgcagatgctgacgaaagattct
gacaaagtgaaggagttctttgagaagctgcaacacacgttggagcagaagcgaaatgag
atcctgtctgactttgagaccatgaagcttgcagtgatgcaggcctacgatccggaaatc
aataagctgaacacgattctacaagagcagcggatggcttttaacattgcagaggccttc
aaagatgtgtctgaacccattatatttctgcaacagatgcaggagttcagggaaaaaatc
aaggtgctcaaagaaactcctttaccttgttccactgtggacatcagtcccacaatgaag
agttttgataccagccagtggaatggaataaaacttgttgatgtggacaaactttccttg
cctcaggaaagcaacactttcaaattcaagattccctctgtcttttcacgcagatttata
gtgaactctcttattttcttgctcattcttgctgtcaccagaatgtcctttgtggagtca
gtcattgacaatctccagtgctggaaatctcagttccttacaatttgcttgtcctatttg
gcagataccgtggagatagcagatcatgcagtcttttactgggaacagatgacagatgga
gcctcacttttaagagaaaagtgtaaaaactatacgttggttgtactggataacgttgcg
cagtttgtgtgcaaatataaactgttgtga
DBGET
integrated database retrieval system