Cyanistes caeruleus (blue tit): 111940858
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Entry
111940858 CDS
T05602
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111940858 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111940858 (TNPO1)
03009 Ribosome biogenesis [BR:
ccae03009
]
111940858 (TNPO1)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111940858 (TNPO1)
Ribosome biogenesis [BR:
ccae03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111940858 (TNPO1)
Pre-60S particles
111940858 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
TOR1L1_N
Vac14_Fab1_bd
IBN_N
HEAT_EF3_N
Cnd1
TPR_IPO5
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
HEAT_GCN1_C
INTS7_N
HEAT_GCN1_C_2
Dopey_N
ARM_TBCD
UNC45-central
RTP1_C1
VPS15-like_hel
HEAT_DAAF5
TPR_TTI1_C
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
111940858
NCBI-ProteinID:
XP_023799482
LinkDB
All DBs
Position
Z
AA seq
911 aa
AA seq
DB search
MGPPEDDIKLVGVVPLAEPLHARPRGPAGSDAAHFGIFLKVSIESNRICLSSFSLQKLEQ
LNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNI
GDSSPLIRATVGILITTIASKGELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDS
AEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIEN
LFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEF
WLTLAEQPICKEVLCRHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRF
HRSKTVAQQHEEDGIEDDDDDDDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHIL
PLLKELLFHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITC
WTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYL
AYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDE
DKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKD
FMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACF
QHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIIN
RPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICT
MITVNPSGVVQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLP
LKERLAAYYGV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccagaagatgatatcaaactggtgggggtagtgccgctggcagagccgctg
catgcgcgccctcgtgggcctgctggctctgacgctgcgcattttggcattttcttgaag
gtctccatagaaagcaacagaatttgtttaagtagtttctctcttcagaaactagaacaa
ctcaatcagtatccagatttcaacaactacctgattttcgttcttacaaagttgaagtct
gaagatgagccaacacgttccttgagtggtcttatcttgaagaataatgtaaaagcacat
tttcacaactttccgaatggggtaactgacttcattaaaagtgaatgtctgaacaacatt
ggtgattcctcccccttaattagagctactgtaggcattctgataacaaccattgcctca
aaaggggagttacagaattggcctgaactcttgccaaagctttgcagcctgttggattcc
gaagattacaatacctgtgagggtgcttttggcgctcttcaaaagatatgtgaagattct
gctgaaattttagatagtgacgtgttggaccggccactcaatatcatgataccgaagttc
ttgcagttcttcaagcatagcagtccaaaaatacggtctcatgcagtggcatgtgtcaat
caatttatcatcagcagaactcaagctcttatgttgcacatagattcttttattgagaat
ctttttgcactggctggcgatgaggagcctgaagtacgcaaaaatgtttgccgtgctctg
gtaatgctgctggaagttcggatggatcgccttcttcctcatatgattagtatagttgag
tacatgcttcaaaggacccaggaccaagatgaaaatgtggctttggaggcatgtgaattt
tggctgactttggctgaacagccaatttgtaaagaggtattatgtcggcatcttactaag
ctgatacctgtgctggtaaatggtatgaaatattcagagattgatattattctgttgaag
ggggatgttgaagaagacgaagctataccagatagtgagcaggatataaggcctcgtttt
catcgttcgaagacagtagctcagcaacatgaagaagatggtattgaagatgatgacgat
gatgatgatgaacttgatgatgatgatactatttctgactggaatttaaggaaatgttca
gctgctgctctagatgtcctagctaatgtatttcgtgatgaacttctgccacacatcttg
ccactgttgaaggaattgctcttccaccccgagtgggtagttaaagaatctggtatcctt
gttcttggtgcaattgctgaaggctgcatgcagggtatgattccatatcttccagagcta
atccctcaccttattcagtgcctctctgacaaaaaggctcttgtgcgctccattacatgc
tggactcttagtcgctatgcacactgggtagttagtcaacccccagacacatacttgaag
ccattaatgactgagttgctaaagcgtatcttggatagcaacaagagagtacaagaagct
gcctgcagtgcctttgctactctagaagaggaggcttgtacagagcttgttccttatctt
gcatatatacttgacactttggtcttcgcatttagtaaataccagcataaaaacctgctc
attctttatgatgctataggaaccctagcagattctgtaggacatcatctaaataaacca
gaatatattcagatgctaatgcctccattaatccagaagtggaacatgctgaaggatgaa
gataaagatcttttccctttattagagtgcctgtcgtcagttgctactgccttgcaatct
ggctttcttccatactgtgaacctgtgtaccagcgttgtgtaaatctggtgcagaagaca
cttgcacaagccatgttgcataatgctcagccagaccaatatgaggctccagataaagat
tttatgattgtggctcttgatttactcagtggtttagctgaaggacttggaggcaacatt
gaacagctagtggctcgcagcaatatcctgacactaatgtatcaatgcatgcaggacaaa
atgcctgaggtacggcagagttcttttgcattgttaggtgacctgacaaaggcatgtttt
cagcatgtcaaaccttgcatcgctgatttcatgccaattttgggaaccaacctaaatcct
gaattcatttctgtgtgtaacaatgccacctgggcaattggagaaatctctatccagatg
ggtatagaaatgcagccttatattccaatggtcttgcaccagcttgtagaaataataaac
agacccaacacaccaaagacgttgttagagaacacagcaataacaattggtcgtcttggt
tacgtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgtacc
tctctgcgaaacataagagacaatgaggaaaaggattcagcattccgtgggatatgtacc
atgattacggtcaaccccagtggagtagtccaagactttatttttttttgtgatgctgtt
gcatcgtggattagcccaaaagatgatcttcgagacatgttctgtaagattcttcatgga
tttaaaaatcaagttggggatgagaattggaggcgtttctctgaccagtttcctcttccc
ttaaaagagcgccttgcagcttactatggagtttaa
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