Cyanistes caeruleus (blue tit): 111941540
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Entry
111941540 CDS
T05602
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111941540 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111941540 (TTC37)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
111941540 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
Fis1_TPR_C
TPR_30
BTAD
Retrotran_gag_2
FlbT
Vit_open_b-sht
Motif
Other DBs
NCBI-GeneID:
111941540
NCBI-ProteinID:
XP_023800447
LinkDB
All DBs
Position
Z
AA seq
1595 aa
AA seq
DB search
MVAGRVTAQRSECACGRAAAEVAEAAVAEAATMSNKEVKAALKSARDAIRNKEYKEALKH
CKAVLKQEKNNYNAWVFIGLAAAELEQPDQAKGAYKKAIELEPNQLLAWQGLANLYEKPS
QIDVKGDLADVYQKLLELYESGDKQKWCDVCNKLVELYHQEKKYLEVAETWQKLIRMKQE
EGAEKTELHQLWKKMIQLLKDSTRNQDNKTGQLLLTAFEHALHSADTVPGEDHQNLYKDF
IQCLSKFPHELARLEKACHDMMALYPTMSYPLEVLCLHFVQSGTLSEEALHCFTRLLEMD
ANSGPGIIGFGIKCLKENKYKEAVKRLTEGLEKTNQCPAAWHYLAEAQMKIHEHRNAVLS
CNQALQALGTTEGPNFRWKTLALQLKAEALIKIADANAAEEAIKALEQIVDGSSDPVVLA
LRGQAYLNKGLMDQASKISQELLLSHPDLAEAHALEGVIHYSQKNYEQAEKSFLNAIERK
AGTAEYHQYLGLTYWFMSDETKKDKGKALTQFLKAAKLDSYMGSAFCYLGNYYRDIAGDK
TRARGCYKKAFELDETDEESGAAAVNLSVELGDMDTALSILNEVTEKARPGTAKWAWLHR
GLYYLRTGQPSKAVVDLQAAIRADPKDSNCWESLGEAYMNRGSYSTALKSFRKASELNPE
LVYSIYRAAALEQILGKYESAIATYQEILKKTENYVPALKGLGECYFMLAKTALDNYFDR
KAVDYIEQALAYFTRAVQHCPDVSCLWKLLGDTCTSVHVISPTKVNVEVLGFLLSKNATK
QMLKKNELLILGGRCYGRALKLMSLPSIWCDLGINYYRQAEHLTAVGADMNEISELLEKS
MQCLKKAVRLDSKNHLYWNALGVVASCSAIGNYALAQHSFIKSVQAEQINVVAWTNLGVL
YLTTGNIEQAHEAFKIAQSLEPSYLLCWIGQALIAESVGSYDTMDLFRHTTELSMHTEGA
KGYAHWVCSTLQDETNRNTELYLYNIVQMNAIPAAQVVLSKYTERNPDDASAFTMFGFLN
ECMHLKQQAAYAYERAASLLKNSEDTEKYNTAMQNYGRSLCALGLCDKAIEVYTSIPLTE
FDGIVGLALAYFKKGLLEESIKAYEKALSVAESEKDKAHVLTALAIIEYKLNKVDAAKTL
LFKCSLKEPSTESLKALCTLGLVKQDATLATAALKELLKHEKGDEGIYERCLIASAVYAL
QGRNVAIQREVSKAIHSYPDNPALWSLLSRLVPLYASKKTKGGAVAGSVAYALDVNCGKE
VLLNIAVNQLVAGCHMLEDKKNNPLKNIQKAIHVFPENPAAWAVLMAACHAENTVVCLNN
TEPKRTGLEMTLVSSVSAKTGESNLPRNYVRTLEEWCLCQAITSLEETGKLSEAEALCNK
GLKSCPEHPTLFLLLRQVQCKQLLQSHKELPDNILEELRKTVMSTSSSAAAWQWLAKIYQ
SQRMMTGAEMCYRKSLQLASQQGSWNGKLSSLLRLAMLALEVCMANVSDEHWSSLVQEAT
TEALKLSPCPLAALLQALLQYNRKMGARETRRMLERVVYHQPAHPETIVSVARWYLLQHL
YAKDDRELIDVLIENAKANGDVRALELNEKLSASA
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgggcgcgtcactgcccagcggtcggagtgtgcatgtggccgggcggcggct
gaggtggcggaggcggcggtggctgaagcagccacaatgtcaaataaggaggtgaaggca
gcattaaagagtgctagagacgcaataagaaataaagagtataaggaggccttaaaacat
tgcaaggcagtcttgaagcaagaaaaaaataactacaatgcttgggtattcattggcctg
gcagctgctgagctagagcagcctgatcaggccaaaggagcatacaaaaaggcaattgaa
cttgaaccaaaccagttactggcatggcagggattagcaaatttgtatgagaaacccagc
caaatagatgtcaaaggagacttagcagatgtttaccaaaaacttttggaactctatgaa
agtggcgacaagcagaaatggtgtgacgtatgtaacaagcttgtggaactataccatcaa
gaaaagaaatatttagaggtggctgaaacttggcagaagctaataaggatgaaacaggag
gaaggtgcagaaaagacagagcttcatcagctttggaagaagatgatccagttactgaaa
gacagtacaaggaaccaggataataagactgggcagttgcttttgactgcctttgaacat
gcgctgcactctgctgacacggttcctggtgaagaccaccaaaatctatacaaagacttc
atacagtgcttgtcaaaatttcctcatgaactagctaggttggaaaaggcatgtcatgat
atgatggctttgtaccctactatgagttaccctttggaagtactttgcttgcactttgtt
cagtcaggtactttgtcagaagaggccctgcactgtttcactaggcttttggagatggat
gcaaacagtggtccaggcatcatcggttttggtataaaatgcctcaaagaaaacaaatac
aaagaggctgtgaagagacttactgaaggtttggagaagactaaccagtgtccagcagca
tggcattatctagcagaggcacagatgaaaatccatgaacacaggaatgctgtcctgtcc
tgcaatcaagctcttcaggctcttggaactactgagggtcctaattttcggtggaagacc
cttgctcttcagttgaaagcagaggctttgattaaaatagctgatgctaatgctgcagaa
gaagccattaaagcacttgagcagattgtagatggaagcagtgatccagtggttttagct
ctcaggggtcaggcttatctaaacaaaggtttaatggatcaggcttcaaagatttcacaa
gagcttctgttgtcccaccctgatctggctgaggcccatgctctagagggtgtcatccat
tattcccaaaagaactatgaacaagcagaaaaaagttttctaaatgctattgaaagaaag
gctggaactgcagagtatcatcagtacctggggctcacatactggttcatgagtgatgag
acaaaaaaagacaaaggaaaagcactcactcagttcttgaaggctgcaaaattggacagc
tacatgggaagtgccttttgttatctaggtaactactacagagacattgctggagacaaa
actagagctcgtggttgctataaaaaggcttttgaactggatgagacagatgaagaatct
ggagcagcagctgtcaacttaagcgtggaacttggagacatggacactgctctgtcaatc
ctgaatgaagtaactgaaaaagcaagacctggtacagcaaaatgggcctggcttcatcgt
ggactttactacttgagaactggtcagccgtcaaaagcagtggttgatttgcaggcagct
atcagggctgatccaaaggattccaactgctgggagtctctaggggaggcttacatgaac
agaggtagctactccacagctctgaaatccttcaggaaagcaagtgaactgaacccagag
ctcgtgtacagcatttacagagctgcagcacttgagcagattctgggcaaatatgaaagt
gcaatagctacctatcaagaaattttaaagaagacagaaaactatgtgcctgcactgaaa
ggacttggtgagtgttatttcatgctggcaaaaacagcccttgataactattttgatagg
aaggctgtggattacatagagcaggcccttgcatattttacaagggcagtacagcactgt
cctgatgtgtcttgcctctggaaactgttaggagatacctgtactagtgtccatgttatt
tcaccaaccaaagtgaatgttgaagtactaggattccttctgagtaaaaatgcaaccaaa
cagatgctgaagaaaaatgagcttctcatactgggaggaaggtgttatggcagagcttta
aaactgatgtctttgcctagcatatggtgtgatcttggaataaattattatcgacaagca
gagcacctcacagcagtgggcgctgacatgaatgagataagtgagctgctagagaagtct
atgcagtgtctcaaaaaagccgtgagacttgacagcaaaaatcatctttattggaatgca
cttggtgtagttgcttcttgtagtgctattgggaattatgctcttgctcaacattcgttc
atcaaatctgttcaagctgagcaaattaatgttgttgcctggaccaacctgggggttttg
tatctgacaactggaaacattgagcaagctcatgaagccttcaagatagcccagtctctg
gaaccttcttacctgttgtgttggattggacaggctcttattgcagagtctgtaggcagc
tatgataccatggatctcttcaggcacacgactgaactcagtatgcatactgagggagca
aaaggctatgcccactgggtgtgttcaacgctgcaggatgaaaccaacagaaacactgaa
ctgtatctgtacaacattgttcaaatgaatgctataccagctgcccaagtggtcttgagc
aaatacacagaaagaaatccagatgatgcttctgctttcacaatgtttgggtttttgaat
gagtgtatgcatctaaaacagcaggcagcctatgcctatgagagggcagcttcactgttg
aaaaattcagaggatactgagaaatacaacacagcaatgcaaaactatggcaggtcactg
tgtgctcttgggttgtgtgataaggccattgaagtttacacgtcaatacccctaactgag
tttgatggcattgtggggctagcattagcttacttcaagaaaggactcttagaagaaagt
atcaaagcctatgaaaaagccttgtctgttgctgagtctgaaaaagataaagcacatgtc
ctgactgctttggcaataatagaatataagctgaacaaagtggatgctgcaaagacactg
ctgtttaaatgctcattaaaggaacctagtacagaaagtctgaaggctttgtgcacattg
ggattggtaaagcaggatgcaacacttgcaacagcagcccttaaagaattactgaagcat
gaaaaaggggatgaggggatttatgagaggtgtcttattgcatctgctgtttatgcatta
caaggtagaaatgtggcaatccagagggaagtctccaaagcaatacacagttaccctgat
aatcctgccctttggtctcttctgtcacgactagttccactgtatgcatccaaaaaaaca
aaaggaggagctgtggcaggaagtgttgcatatgcacttgatgtaaactgtggaaaggaa
gtcctactgaatattgcagttaatcagttggtagcaggatgtcacatgttagaagataag
aaaaacaatcctctgaaaaatattcagaaggccatccatgtctttccagaaaatcctgct
gcttgggcggtgctaatggcagcctgtcacgctgaaaacactgttgtctgtctaaacaac
actgaaccaaaacgaacaggtctagagatgacactggtgtcttcagtttcagccaaaact
ggagaaagtaaccttccacgtaattatgtccgtactcttgaagagtggtgtctgtgtcaa
gctattaccagtctagaggagactggtaaactatcagaagctgaagctctttgtaacaag
ggtttaaaaagctgccctgagcacccaactctgtttttgcttttgagacaagttcagtgt
aagcagctgttgcagtctcacaaagaacttccagacaacatcctggaggaacttcgcaag
acagtcatgtccacttcatcctcagctgcagcctggcaatggctggcgaaaatatatcag
tctcagagaatgatgactggagcagagatgtgctacagaaagagtctgcagttggcatca
cagcagggcagctggaacgggaagttatccagtctgctcaggctggcaatgctcgcactg
gaagtctgcatggctaacgtctcagatgaacactggtcatccttggttcaggaggcaaca
actgaagctttgaaactttctccttgccccttggcagctctgcttcaagccctgctacag
tataatcgcaaaatgggagcaagggagacccggcgaatgttggagagagttgtttatcat
caaccagcgcatccagaaaccatagtgtcagtggcacgctggtacctcctgcaacatctt
tatgccaaagatgatcgtgaattaatagatgtgcttatagaaaatgccaaagctaatgga
gatgttagagctctggaattaaatgagaagttgtcagcaagtgcctag
DBGET
integrated database retrieval system
