KEGG   Cajanus cajan (pigeon pea): 109797403
Entry
109797403         CDS       T04868                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109797403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccaj03041]
    109797403
Spliceosome [BR:ccaj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109797403
 Complex B
    109797403
 Complex C
   U2 SnRNP specific factors
    109797403
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N HD_assoc
Other DBs
NCBI-GeneID: 109797403
NCBI-ProteinID: XP_020213024
LinkDB
Position
3:8433216..8441293
AA seq 508 aa
MSSTVLEVTRAAHEEVERLERLIVKELQNEPNTNKERLYQSHRVRNMIDTISSTTEKLIE
IYEDNDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDASDDFEALL
KEEPQIEFSGEEALGRYLDMHELYHQYVNSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQ
YREYMMNLLEYLLYFFQRTEPLQDLDRIFSKVTTEFEENWAAGKIQGWENVNQENGHIPA
QHAAIDLDYYSTIEEVMEVGPERLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDRK
HFAKGARGVDKNGVASVPQDGNSKEIALMEAKMTKLCDLLEETIARTKDNVVKKQALTYE
EIEAEREEEETQEDTESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN
YSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKKIQQRQGVNKWRP
DLEEEYEDKEGNIYNKKTYADLQRQGLI
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcgtcgacggtgctggaagtgacgcgcgcagcacacgaggaggtggagcggttggag
cggctgatagtgaaggagctccagaatgaaccgaacaccaacaaagagcgtttgtatcag
agtcaccgtgtgcggaacatgatcgacaccatttcctccaccactgaaaagcttattgag
atatatgaagataacgacaatgcgaggaaggacgagattgctgcactgggaggccaaacc
gccactggaattaacgttttcagtgctttttatgatagactcaaggagattcgagagtat
cacaggaagcatccagttgcacgcgttgttgacgctagtgacgattttgaagcacttctc
aaagaggaacctcaaattgagtttagtggagaggaagctcttggtcgatacttagacatg
catgaattataccatcaatatgtcaattctaagtttggtgagcccattgagtattctgca
tatcttgatgttttctcagacacagataagattccccgcaaaatgaaaatgaccaggcag
taccgagaatatatgatgaatcttttggagtatctattatacttcttccagcggacagag
cccctgcaagatcttgatcgaattttctcaaaggtaacaactgagtttgaagaaaattgg
gctgctggtaagatacagggatgggaaaatgtcaatcaggagaatggacatatacctgct
cagcatgctgcaattgatcttgattattatagtacaattgaagaggtgatggaagtgggt
cctgaaaggttaaaggaggcactggctgcattggggcttaagactggtggtactgttcag
caacgtgcagagaggctgtttctcactaagcacacgcctcttgaaaagttggacaggaag
cattttgctaagggggcacgtggtgtagataaaaatggggttgcttcagttccacaagat
ggaaattctaaagaaattgcattgatggaggccaaaatgacaaaactctgtgatttgtta
gaagagacaattgctcgaacaaaagataatgttgtaaagaagcaggccctaacatacgag
gaaattgaagcagaacgtgaggaggaagagacacaagaagacactgaaagcgaagacgag
gagcaacagatatataatcccctaaaattaccaatgggatgggatgggaagcctatacct
tattggttgtataagctacatggtctgggtcaggaatttaagtgtgaaatatgtgggaac
tacagttattgggggcgtcgggcttttgaacgacattttaaagaatggcgccatcaacat
ggcatgcggtgtcttggtatcccaaatactaagaacttcaatgaaatcacatcaattgag
gaagccaaggatctttggaagaagatacagcaaagacaaggagtaaacaagtggcggcca
gatctagaggaagagtacgaagacaaagaaggcaacatctataataagaagacatacgcc
gacttacagcgccaaggactgatatga

DBGET integrated database retrieval system