Cajanus cajan (pigeon pea): 109797750
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Entry
109797750 CDS
T04868
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109797750
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109797750
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
109797750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
T2SSE
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
109797750
NCBI-ProteinID:
XP_020213465
LinkDB
All DBs
Position
3:6531204..6569392
Genome browser
AA seq
2088 aa
AA seq
DB search
MLIQIPRLTNSLRDPFDVDQYYLHRKTILHNQKPRNSASSLDESELARKIVYGWEEASSE
VRQAYKQFIGAVVELVDGEMRSEEFHEVALTVYRLFGRPMEEEDYVDRIISEKKFELQKL
IGHTVADAKLKQVASLAQRLLNLQPSNKNSTISFERNADADEELEFGADLFFQAPARFLV
DVSLDHGDMMDFESTVSLEFHKEQYGLTGSTDHSVVDGEKFNLTWLREACDKIIRNCNSQ
LSRDELAMAICRVLNSEKPGEEIAGDLLDLVGDGAFETVQNLLLHRKEIVDSIHHGLLVL
KSDKNASNAQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNRRGIEHAGDGDLSALDFSS
LLQASERKKLFDEMIGSGDRSESIAVTALPEGTVRKHFKGYEEVIIPPKPTAPLKPGEKL
IEIKELDEFAQAAFRGYKSLNRIQSRIFSTVYGTNENILVCAPTGAGKTNIAMISILHEI
GQHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSQRLSPLNMIVRELTGDMQLSKNELEE
TQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVEST
QSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARNE
LLNDICYSKVVDSLRQGHQAMVFVHSRKDTAKTANKLVELARRNEDLDIFSNNTHPQYTF
MKKEVIKSRNKDLVELFEFGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNL
PAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLR
LLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWD
EVMADPALSSKQRSLVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETY
NDMLRRHMNDSEVINMIAHSSEFENIAVREEEQNELEMLARTSCPLEIKGGPSNKHGKIS
ILIQLYISRGSIDSFSLVSDASYISASLARITRALFEICLRRGWCEMTLFMLEYCKAVDR
QVWPHLHPLRQFDKDLSTDILRKLEERGADLDRLFEMEEKDIGALIRYVPGGRLVKQYLG
YFPSLQLSATVSPITRTVLKVDLIITHVFTWKDRFHGTAQRWWILVEDSENDHIYHSELF
TLTKRMARGEPYKLSFTVPIFEPHPPQYYIHAISDSWLHAEAFYTITFHNLPLPEARTSH
TELLDLKPLPVSSLSNSAYEALYKFSHFNPIQTQTFHVLYHTDNNILLGAPTGSGKTISA
ELAMLRLFNTQPDMKVIYIAPLKAIVRERMSDWQKRLVSQLGKKMVEMTGDYTPDLMALL
SADIIISTPEKWDGISRNWHTRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQ
TERAVRFVGLSTALANAGDLADWLGVEEIGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMN
SMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEQSRQFLNLPEEALQMV
LSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQILVCTSTLAWGVNLPAHL
VIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYE
PFPVESSLREHLHDHINAEIISGTICHKQDAVHYLTWTYLFRRLMVNPAYYGLENADSEF
LNSYLSSLVQNTFEDLEDSGCIKMDEDKVEAMMLGSIASQYYLSYMTVSMFGSNIGPDTS
LEVFLHILSAASEFDELPVRHNEEKYNEALSEKVKYPVDKNRLDDPHIKAILLFEAHFSQ
LELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDKDSS
LWMLPCMNTDLISSLSKRGIFNVQELLDIPKAALQTITANFPSSRLYQDLQHFPNVKMKL
KVQRRDTDGEKSHTLHIRLEKTNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALK
RVSFSDHLFTSMKLPPTPENLQGIKLILVSDCYIGFEQEHSVEELVVC
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcagatacctcgcctcactaattctctcagagaccccttcgatgtggaccag
tactatcttcatcgcaaaaccattctccacaaccaaaagcctcgcaactctgcgagctcg
cttgatgaatcggaactggcgcggaagattgtctacgggtgggaagaagcttcatcggaa
gtgcggcaggcctacaagcagtttataggagcagtggtggagttggttgacggtgaaatg
cgctccgaggagttccacgaggtggcgctgacagtataccgtctttttggaaggccaatg
gaggaggaggattatgttgatagaattatttcagaaaaaaagtttgaattacaaaaactt
attggacatacagttgctgatgccaagttgaagcaagttgcatctctagcacagaggctt
ttaaatttgcagccaagcaataaaaactccaccatttcttttgaaagaaatgcagatgct
gatgaagaattagaatttggagctgatttgttttttcaagcaccagctcgtttcttggtt
gatgtatctttggatcatggagatatgatggattttgaaagcactgtttcattagaattt
cacaaagaacagtatggtcttactggctcaacagatcattctgttgttgatggggaaaag
ttcaacctgacttggttaagagaggcatgtgataaaataatcaggaattgtaattcacag
ctatctcgagatgaattggcaatggccatttgtcgggttcttaattcagaaaagcctggt
gaagagatagctggagatctgttggatcttgttggcgatggtgcatttgaaactgtgcaa
aatcttttattgcatcgaaaggagattgttgattctattcatcatggcttgttggtattg
aagtctgataaaaatgcttcgaatgctcagtctcgcatgcctagttatggaacacaggtg
actgttcaaacagaatcagaaaagcaaatagacaagctccggcgcaaggaggaaaagcga
aatagacggggaatagaacatgctggtgatggtgacttgtctgctctggatttctcatct
ttacttcaagcaagtgagaggaaaaaattgtttgatgagatgattggttctggagatagg
tccgagtcaatagctgttactgcccttcctgaaggaactgtaaggaagcattttaagggg
tatgaagaggttattattccccccaaaccaactgcaccattgaaacctggagaaaagctg
attgagatcaaggagttagatgaatttgcacaagctgcattccgtggctacaaatcacta
aatcgaattcagagcaggatattttcaactgtttatggaactaatgagaatattctagtg
tgtgctcccacaggagctgggaaaactaacatagctatgatttcaattctacatgagatt
ggacagcacttcagggatggttacttgcataaagatgaatttaagatagtttatgttgct
ccaatgaaggctttggctgcagaagtcacatcaacattcagccaacgtttatctcctttg
aatatgattgtcagagagcttaccggagatatgcaactgtctaaaaatgagctcgaagaa
actcagatgatagtgacaacacccgagaaatgggatgtcattacacgcaagagcagtgac
atgtcactgtcaatgctcgtaaagctcttaattattgatgaagtccatctactcaatgat
gatagaggtcctgtgatagaggctctagttgctaggaccctacggcaggtggaatctact
cagtcaatgatacggattgtgggcctttctgccactcttcctaattacctggaggttgca
caatttctcagggtaaatccagacacgggtcttttcttctttgactctagttatcgtcca
gtgcctcttgcacaacagtatattggaattagtgagccaaactttgcagctcgtaatgaa
ttgttgaatgatatatgctattcaaaggttgttgattctcttaggcaaggtcatcaggca
atggtatttgtccattcacgaaaggacactgcaaagacggctaataaactggttgaactt
gcacgaaggaatgaggatttggatatttttagtaataatacacatccacaatataccttt
atgaagaaagaagtcattaagtccagaaacaaagatcttgttgagctttttgaatttggt
gtgggtgtgcatcatgctgggatgctacgtgcagatagaggacttactgagcggcttttc
tctgatggacttctgaaggttcttgtctgtacagcaactctggcttggggtgtcaatcta
cctgcacacacggttgtcattaagggtacccaattatatgatccaaaggctggtgggtgg
cgagacctgggtatgcttgacgttatgcagatatttgggcgagctgggagacctcaattt
gacaaaagtggtgaaggtatcataattacatctcatgacaaactagcatattatctgcga
cttctgacaagccaactccctatagaaagccagtttattagctccttgaaagataattta
aatgcagaggtggcattgggtactgtaactaatgttaaggaagcctgtgcatggcttggc
tatacatatcttttcataaggatgaggatgaatcctttggcatatggtattgggtgggat
gaggtgatggcagatcctgctttgagttcgaagcagagatctcttgtaattgatgctgca
cgtgcacttgataaagcaaaaatgatgcggtttgacgagaaaagtggcaatttttattgt
accgagcttggtcgcattgcaagccatttttacattcaatattccagtgttgaaacgtac
aatgatatgttgagacgccacatgaatgacagtgaggtgattaacatgattgcacattca
tctgaatttgagaatattgctgttcgagaagaagaacagaatgagctagagatgttggca
cgcacatcttgtccattagaaatcaagggtggtccttccaataagcatggaaagatttcc
attttgattcagttgtacatatctcgaggttctatagattctttttctttggtgtctgat
gcttcatatatcagtgcaagcttggcccgaataacacgggctttatttgagatttgttta
cgaagaggctggtgtgagatgactcttttcatgttggaatattgcaaagctgtggatcgc
caagtttggccacatctacatcctcttagacaatttgacaaggatctttctacagatata
ttgaggaagcttgaagaacgtggggctgacctagatcgcctgtttgagatggaggaaaaa
gacattggggcattaattcgatatgtgcctggaggaaggttggtcaagcaatacctaggg
tattttccatcacttcaattatcagcaactgtgagtccaattaccagaactgtgttgaag
gttgatttgatcattacgcatgttttcacatggaaagatcgatttcatggtacagctcaa
cgttggtggattttggtagaggattctgagaatgatcacatctaccactcagaactcttt
accttgacaaagcgaatggctaggggcgaaccttacaagctttccttcactgtacctata
tttgagccacatccgccacaatattacattcatgctatttctgattcctggcttcatgca
gaggcattctacactattacttttcacaatttgccattgccagaggctcgtacttctcac
acagaactccttgatttaaaaccccttcctgtgtcttcccttagcaacagtgcttatgaa
gcattatataaattttcacattttaatcctatacaaacacagactttccatgtcttgtat
cacacggacaacaatattctgttaggagctccaactgggagtggaaaaactatatctgct
gagcttgctatgcttcgtcttttcaatactcagcctgatatgaaggttatttatatagct
cctttgaaagctattgttagggaaagaatgagtgattggcaaaagcgtcttgtctctcag
ctagggaaaaagatggttgaaatgactggagactatactcctgatttgatggccctcttg
tcggccgatatcatcatatcaactcctgaaaagtgggatggaataagtcgtaattggcat
actcgtagctatgtcacaaaggttggacttatgatattggatgagattcacttattggga
gctgatcgtgggcctatccttgaggttattgtttctaggatgagatacatatcatcccaa
acagagcgtgcagtacggtttgtaggcctttctacagcactggctaatgctggtgatcta
gctgattggttaggcgttgaggagattgggctcttcaatttcaagccaagtgtgaggcct
gtaccacttgaagttcatattcagggttatcctggaaagtattactgcccaaggatgaac
agtatgaacaaaccagcatatgctgcaatatgcacacattcacctgcaaaacctgttctt
atatttgtctcatcacgacgccagacaagacttactgcacttgacctaattcagtttgct
gcttcagatgaacaatcgagacaattccttaatttaccagaagaagccctgcagatggtt
ctgtctcaagtctctgaccaaaacttgaggcatactttacaatttggcattggattacat
catgcaggcctgaatgacaaagacagatctctggttgaggaactttttgcaaacaacaag
attcagatattggtttgtaccagcacattagcttggggtgtgaatcttccagctcatcta
gtaattatcaaggggacagaatactatgatggaaaagcaaagaggtatgttgattttcca
atcacagatattttgcaaatgatgggtcgtgctggacggccacaatttgatcaacatggg
aaagcagtgattcttgttcatgaacccaagaagagcttctacaaaaagtttttgtatgaa
cccttccctgttgaaagtagtttgagggagcatttacatgatcacataaatgctgaaatt
atttctggaacaatttgccataaacaagatgcagtgcattatcttacatggacttactta
tttcgtagactgatggttaatccggcttactatggattagagaatgctgattccgaattt
ctaaattcatatttgtctagcctagtgcagaacacatttgaggatttggaagacagtgga
tgcataaagatggatgaagacaaggtggaggctatgatgttgggttcaattgcatctcag
tattacctcagctacatgactgtatcaatgtttggttcaaacataggtccagatacatca
cttgaagtgtttttgcatatcttatctgctgcttctgaatttgatgaactacctgtgcgt
cataatgaggaaaaatacaatgaagcactgtctgagaaagttaaatatccagtggataag
aaccgtctggatgaccctcacatcaaagcaattcttctatttgaggctcatttttctcaa
ctggagttaccaattagtgactatgtcacagacttgaaatcagtattagatcagagtata
cgcataattcaggccatgattgatatatgtgcaaatagtggttggctttcaagctcaatt
acttgtatgcgtcttctgcaaatggtcatgcagggtttgtggttcgacaaggactcttcc
ttatggatgctgccatgcatgaatacagatctgataagttcacttagcaaaaggggaatt
ttcaatgtacaggaattactagacattcccaaagcagcattgcagactataactgcaaat
tttccatcttcaagattgtatcaggatctacagcatttccctaatgttaaaatgaaacta
aaagttcagaggagggacactgatggtgagaagtcccacacattacatatcagattagag
aagaccaattctagacgacattcttctagagcatttgtacctcgctttccaaagataaaa
gaggaacaatggtggttggttcttggtaatacctctacgtctgagctatatgctttgaaa
agagtttctttttcagatcacttatttacctcaatgaaattgcctccaactccagagaat
cttcagggcataaagctgattttagtctccgattgttacattggatttgaacaagaacac
tccgttgaagagcttgttgtatgttaa
DBGET
integrated database retrieval system
