Cajanus cajan (pigeon pea): 109805111
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Entry
109805111 CDS
T04868
Name
(RefSeq) polyadenylate-binding protein 1
KO
K14396
polyadenylate-binding protein 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109805111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109805111
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109805111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HDV_ag
CC149
BicD
TPD52
RRM_7
HAP1_N
RRM_occluded
Lge1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
109805111
NCBI-ProteinID:
XP_020222676
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All DBs
Position
9:4180972..4189685
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AA seq
215 aa
AA seq
DB search
MEQEEHEVYGADIPDEEVDMDADAEQQEDEQLPPNHTSKELEDMKKRLKEIEEEASALRE
MQAKVEKEMGAVQDSSGTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV
TILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYFGRRP
TGFRSRRPFMPAPFFPPYGYGRVPRYRRPTRYRPY
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaagagcacgaagtgtacggtgcagacattcccgacgaagaggttgacatg
gacgccgacgccgagcaacaagaagatgagcaacttccccccaatcacacaagcaaggaa
ttggaggacatgaagaagaggctgaaggagatcgaggaagaagctagcgcgctccgcgaa
atgcaggccaaggttgagaaagagatgggcgctgttcaagattcttctggcacttctgca
actcaagctgaaaaggaggaagtggattctcggtcaatctatgttggtaatgttgactat
gcatgtactcctgaagaagtgcaacaacattttcagtcctgtggaactgtgaacagggtg
acaatactgacagacaaatttggtcaacctaaagggtttgcttatgtagagtttgttgag
gttgatgctgttcagaatgccctcctgttgaacgaatcagaattgcatggtcgacaattg
aaggtgtctgccaagcgtacaaatgttcctggaatgaagcagtattttggaagaagacct
actggtttccgatctaggaggcctttcatgcctgccccattctttccaccatatggttat
ggaagggttccaaggtatagaagacctactcgatacaggccatactag
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