Cajanus cajan (pigeon pea): 109818552
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Entry
109818552 CDS
T04868
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109818552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109818552
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109818552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Peptidase_C10
Motif
Other DBs
NCBI-GeneID:
109818552
NCBI-ProteinID:
XP_020239637
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MPRRGGGSQRKKQPSASNSTSTSASQTGKVSENQTGAQQNSEGRNKFQSASDNGTLTEIS
REAVGKLLCRANKVGTSKEKKKPEFEPEQKGMRVLDPVLQQKTSEIGHCSRNSMENAFAE
EKCGNSGQDNLDNKEELDDSDWEDGTVARDDRHVTIELNMTPHSTVQKQIRRASAEDKDL
AELVHKVHLLCLLARGRLIDNACDDPLIQASLLSLVPAHLLQLSNVTKLTSKALYPLISW
FHNNFHVKNCTNREISPCFGLASALESHEGSSEEIAALSVALLRALNLTTRFVSILDVAP
LKPIQVASGSRNGVFKTSTLMISKRKLDFKPPQESLSFSERQSVCESSLVHSQKSKKCRV
TNHMDQCSDPSVVDSVAISKDSETQDGNLESCITDKSHKSKRKGDLEFEMQLEMALSATA
VGCQESKNELGANPDSSSFSCPSKRMKRVIGEESLTSPQVISTAIGSMKVGSPLYWAEVY
CSEENLTGKWVHVDAVNLIIDGEDKVEAMVAACKTSLRYVVAFAGQGAKDVTRRYCMKWY
KIASHRVNSSWWDSVLAPLRDLESGATGGVSHLRTNQRISSESNMSDSFVPTRSSVEDIE
LETRALTEPLPTNQQAYKSHPLYAIEKWLTKYQVLHPQGPILGFCSGHPVYPRTCVQTVK
TKERWLREGLQVKLNEHPVKELQRSIKPQKIQDSEPDDYGCTDSMGKIKFYGKWQLEPLN
LPHPVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKNG
RSYPVFDGIVVCTEFKDVLLEAHAEEDERRQAEEKKRDETQALSRWYQLLSSIVTRQRLN
NRYINNGLSSEIPTVVSCMNKDESSATVCDSNDKNQNQRHRQVDKCDANLDPSLRTPVKD
HEHVFLKELESFDEATSLLTKRCQCGFSVQVEVL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagaggaggcggttcccagcggaagaagcaaccctcagcttcaaactcaacc
tcaacctcagcgtctcaaacggggaaggtttcagaaaatcaaaccggagcacagcaaaac
tcagaaggtcgaaacaaatttcaatcagctagcgacaatggaacgctgaccgaaatatct
cgggaggctgtcggaaagcttttatgccgtgctaataaagttggcacctccaaggaaaag
aagaagcctgagtttgagccagaacagaaaggaatgcgagtcttggatccagttctccaa
cagaagacttcagaaattggacattgtagtagaaattccatggaaaatgcttttgcagag
gagaaatgtggtaattcaggccaggacaacttggataacaaagaagaactggatgactca
gattgggaagatggtacagttgccagggatgatcgtcatgtcacaattgaattgaatatg
acccctcattcaactgtgcagaaacaaattcgtcgagcttctgctgaagataaggacttg
gctgaacttgtacacaaagttcacttgctttgtttactagctcgaggaagattaatagac
aatgcttgtgatgatccccttattcaggcttctttgctttcacttgttccagcacacttg
ctccagctatcaaatgttacaaaactcacttcaaaagctctttatcctttaatatcatgg
ttccacaataatttccatgttaaaaactgtacgaatagagaaatttcaccatgctttggt
ttggcatcagctttagaatcacatgagggcagttctgaagagattgcagcattatcagtg
gctctattaagagctttaaatcttactaccaggtttgtgtccattttggatgttgcccct
ctgaaaccaattcaagttgcaagtggatctcgcaatggggtatttaagacttctacactg
atgatatctaagcgcaaattggactttaagccacctcaagaatcattatcttttagtgag
agacaaagtgtctgtgaaagttctcttgtccattcacagaaaagtaagaaatgtcgtgtg
acaaatcacatggatcagtgtagtgatccttctgttgttgatagtgttgcaatctcaaaa
gattctgagacacaagacggtaatctggaatcatgtatcactgacaaatctcataaatca
aagaggaaaggggatcttgaatttgagatgcagttggaaatggctctctctgctacagca
gttggatgtcaggagagtaaaaacgagttaggtgcaaatcctgattcatcgagtttttct
tgtccatcaaaaagaatgaaaagggttattggcgaagaatctttgacttccccacaagtg
atttctacagcaattgggtcaatgaaagtaggatcacctctgtattgggcagaagtatat
tgcagtgaagaaaatttgacaggaaagtgggtgcatgttgatgctgtgaatttgattatt
gatggagaagacaaggttgaagccatggtagctgcatgcaaaacatctttgagatatgtt
gtcgcatttgctgggcaaggggccaaagatgtgacccgcaggtactgtatgaagtggtac
aagatagcatcacatcgggttaattcatcatggtgggattcagtgctggcaccattgaga
gacttagagtctggggcaactggaggtgtgtctcatttaagaacaaaccaaagaatttct
tcagaatccaacatgagtgattcttttgtccctacaaggagctccgttgaggatattgag
ttggaaaccagggcattaactgaacctcttccaaccaatcagcaggcctacaaaagtcat
ccactttatgccatagaaaaatggcttacaaagtatcaagtacttcatccacagggtcca
attctgggcttttgttcaggtcacccagtgtaccctagaacttgtgtgcaaacagttaag
acaaaagagagatggctgcgggaaggtctgcaagttaaactgaatgaacatcctgtgaag
gagcttcaacgttccataaagcctcaaaaaatacaagattcggaacctgatgactatggc
tgcactgattctatggggaaaattaaattttatgggaagtggcaactggaaccattaaat
ctgcctcatcccgtgaatggaatagttcccaagaatgaacgaggtcaggtagacgtttgg
tctgagaaatgtcttccgccagggactgtacacttaaggtttccaaaggcattttctgtt
gcgaagaggcttgaaattgattatgcgcctgctatggttggttttgaatttaaaaatggc
cgttcatatcctgtctttgatggtatagtggtgtgtactgagttcaaggatgtactgctc
gaggcacatgcagaagaagatgaaaggcgacaggctgaagaaaagaaaagggatgaaaca
caggctcttagtcggtggtaccagcttctttcttctattgtaactcgtcaaaggttaaat
aatcgttatatcaataacggtttgtcttcagagataccaactgttgtttcatgcatgaat
aaggatgagtccagtgccacagtttgtgatagtaatgacaagaatcagaaccaaagacac
cgacaggtggacaaatgtgatgctaatcttgatccttcattaaggacgccggtaaaagat
catgaacatgtgtttttgaaagagttagagagctttgatgaggcaacatctctgttgacg
aagcgatgtcaatgtggattttcagtccaagtagaagtattataa
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