Cajanus cajan (pigeon pea): 29293665 Help Entry 29293665          CDS       T04868                                  Symbol rpoB, BKH98_gp063 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism ccaj  Cajanus cajan (pigeon pea) Pathway ccaj03020   RNA polymerase Brite KEGG Orthology (KO) [BR:ccaj00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     29293665 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccaj03021]     29293665 (rpoB)    03400 DNA repair and recombination proteins [BR:ccaj03400]     29293665 (rpoB) Enzymes [BR:ccaj01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      29293665 (rpoB) Transcription machinery [BR:ccaj03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      29293665 (rpoB) DNA repair and recombination proteins [BR:ccaj03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       29293665 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  29293665 NCBI-ProteinID:  YP_009309154 UniProt:  A0A1D8DAR4 LinkDB All DBs Position Pltd:35046..38258 Genome browser AA seq 1070 aa AA seqDB search MLGGGNEGMSTVPGLNQIQFEGFCRFIDQGLIEGLLKFPKIEDTDQEIEFQLFVETYQLL EPSINEKDVVYESLTYSAELYISAGLIWKSSRDIQEQTIFVGNIPLMNSLGTSIVNGIYR IVINQILQSPGIYYRSELDPNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI LVLSSAMGSNLSEILENVCYPEIFVSFLNDKDKKKIGSKENAILEFYRQFACVGGDPVFS ESLCKELKKKFFQQRCELGRIGRRNMNQKLNLDIPQNNTFLLPRDILTAADHLIGMKFGM GIFDDINHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP LTTTYESFFGLHPLSQVLDQTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR ICPIDTSEGINVGLIGSLAIHVRIGSWGSIESPFYEISERSKRIRMLYLSPSRDEYYMVA TGNSLALNRDIHEEQIVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN RALMSSNMQRQAVPLSRCEKCIVGTGLERQVALDSGVSAIAEHEGNIIYTDTDKIFLFGN GDTLSIPLTIYQRSNKNTCMHQKSQVQRGKYIKKGQILADGAATVGGELALGKNVLVAYM PWEGYNSEDAVLISERLIYEDIYTSFHIRKYEIQTHMTSYGSERITNQIPHLEAHLLRNL DKNGIVILGSWVETGDILVGKLTPQIAKESSYSPEDRLLRAILGIQVSTSKETCLKLPIG GRGRVIDVRWIQKKGGSSYNPETIRIYILQKREIKVGDKVAGRHGNKGIVSKILSRQDMP YLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGMLDRHYRITPFDERYEQEASRKLV FSELYEASKQTSNPWIFEPEYPGKSRIFDGRTGNSFKQPAIMGKPYILKLIHQVDDKIHG RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKTRQEVL GTTIIGGTIPKPTDAPESFRLLVRELRSLVMELNHFLVCEKNFRIHRKEA NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgcttgggggtggaaatgaaggaatgtctacagtacctggattgaatcagatacaattt gaagggttttgtaggttcattgatcagggcttaatagaaggtcttttaaagtttccaaaa attgaggatacagatcaagaaattgaatttcaattatttgtagaaacatatcaattatta gaaccctcaataaatgaaaaagatgttgtatatgaatcgcttacatattctgctgaatta tatatatccgcgggattaatttggaaaagtagtagagacatacaagaacaaactattttt gttggaaacattcctctaatgaattctctgggaacttctatagtaaatggaatatacaga attgtaatcaatcaaatattgcaaagccctggtatctattaccgttcagaattggaccct aacggaatttcggtctataccggcaccataatatcagattggggggggagattagaatta gagattgatagaaaagcaaggatatgggctcgtgtgagtaggaaacagaaaatctctatt ctagttctatcatcagctatgggttcgaatttaagcgaaattctagagaatgtttgttat cctgaaattttcgtgtctttcctaaatgataaggataaaaaaaaaatagggtcaaaagaa aatgccattttggagttttatcgacaatttgcttgtgttggcggagatccagtattttct gaatctttatgtaaagaattaaaaaaaaaattttttcaacaaagatgtgaattaggaagg attggtcgacgaaatatgaaccaaaagcttaatcttgatatacctcagaacaatacattt ctgttaccacgagatatattgacagctgcggatcatttgattggaatgaaatttggaatg ggcatatttgacgatataaatcatttgaaaaacaaacgtattcgttccgtagcagatcta ttacaagatcaatttggattggccctggttcgtttagaaaatatggttagaggaactata tgtggagcaattagacataaattgataccaactcctcagaatttggtgacttcaactcca ttaacaactacttatgaatctttttttggattacatccattatctcaagttttggatcaa accaatccattgacccaaatagttcatggaagaaaattgagttatttgggccccggagga ttgacagggcgaactgctagttttcggatacgagatatccaccctagtcactatggacgc atttgtccaattgacacgtctgaaggaattaatgttggacttattggatctctagcaatt catgtgaggattggtagttgggggtctatagaaagtccattttatgaaatctctgagaga tctaaaagaatacgcatgctttatttatcaccaagtagagatgaatactatatggtagca acaggaaattctttggcacttaatcgagatattcacgaggaacagattgttccagcccga taccgtcaagaatttcttacaattgcatgggaacaggttcatcttcgaagtatttttccc ttccaatatttttctattggagcttccctaattccttttatcgaacataatgatgcgaat cgagctttaatgagttctaatatgcaacgtcaagcagttccgctttctcggtgcgaaaaa tgcattgttggaactggattagaacgtcaagtagctttagattcaggggtttccgctata gcggaacacgagggaaacatcatttataccgatactgacaagatttttttatttggtaat ggggataccctaagcattccattaactatatatcaacgttccaacaaaaatacttgcatg catcaaaaatcccaggttcagcgaggtaaatacattaaaaagggacaaattttagcggat ggtgctgctacagttggcggcgaactcgctttgggaaaaaacgtattagtagcttatatg ccatgggagggttacaattctgaagatgctgtactcattagtgaacgtctgatctatgaa gatatttatacttcttttcacatacggaaatatgaaattcagactcatatgacaagctat ggttctgaaagaatcactaatcaaattccacacctagaagcccatttactccgaaattta gacaaaaatggaattgtgatcctggggtcatgggtagaaacgggcgatattttagtgggt aaattaacgcctcaaatagcgaaagaatcctcgtattccccggaagatagattattacga gctatacttggcattcaggtatccacctcaaaggaaacttgtctaaaactacctataggt ggtaggggtcgagttattgatgtgagatggatccaaaaaaagggaggttccagttataat ccagaaacgattcgtatatatattttacagaaacgtgaaattaaggtaggagataaagtg gccgggagacatggaaataaaggtatcgtttcaaagattttgtctagacaagatatgcct tatttgcaagatggaagacctgttgatatggtcttcaatccattaggggtaccttcacga atgaatgtaggacaaatatttgaatgttcactcgggttagcaggaggtatgctggataga cattatcgaataacacctttcgatgagagatatgaacaagaagcttcaagaaaacttgtg ttttctgaattatatgaagccagtaaacaaacatcgaatccatggatatttgaacccgag tatcccggaaaaagcagaatatttgatggaagaacaggcaattcttttaaacaacctgct ataatgggaaagccttatatcttgaaattaattcatcaagttgatgataaaatacacgga cgttccagtggacattatgcacttgttacgcaacaaccacttagaggaagggccaaacag ggaggacaacgggtaggcgaaatggaggtttgggccttggagggatttggtgttgctcat attttacaagagatgcttacttataaatctgatcatattaaaactcgccaagaagtactt gggactacgatcattggaggaacaatacctaaacctacagatgctccagaatcttttcga ttgctcgttcgagaattacgatctttagttatggaactgaatcatttccttgtatgcgag aagaacttccggattcataggaaggaagcttaa

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