Ceratina calcarata (carpenter bee): 108622059
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Entry
108622059 CDS
T06061
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108622059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108622059
Spliceosome [BR:
ccal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108622059
Complex C
U4/U6.U5 tri-SnRNP related factors
108622059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
zf-C2H2
DUF5034
Exonuc_VII_L
SNRNP27
DUF4407
Ribosomal_L37
Motif
Other DBs
NCBI-GeneID:
108622059
NCBI-ProteinID:
XP_017875201
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MSTRPDDHRRKWNREEYERIALQRLQDEIAEEELGIPKQPAVKRELLKQRDYKVDLESKL
GKSFVINKNTPSSQTGGYYCNVCDCVVKDSINFLDHINGTKHQRNLGMSMKIERSTLDQV
KARFAMNKKKLEEKKKDYDLEQRVKELKEEEEKIKEYRKEKRKDKKRKIEEANEDAGGPS
DEMAAIMGFSGFGSKKK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcgacctgatgatcatagaagaaaatggaacagagaagaatatgaaaggata
gcgcttcagcgtcttcaggatgagatagctgaagaagagttgggaataccaaaacaacca
gctgtaaaaagggagctgctcaagcaacgagattataaagtcgatctagaatctaaatta
ggaaaaagttttgttatcaataaaaatacaccatcttcgcaaactggagggtactattgc
aatgtctgtgattgtgttgttaaggattccattaatttcctggaccacatcaatggcaca
aaacatcaacgaaacctgggtatgtcaatgaaaatagaacgttctactctagatcaggtc
aaagctcggttcgcgatgaataaaaagaaattagaggaaaagaagaaagattacgattta
gagcaaagagtgaaagaattaaaagaagaggaggaaaagatcaaggaatacagaaaagaa
aagaggaaagacaagaagaggaaaatcgaagaagccaatgaggacgccggtggtccttcg
gatgaaatggcagcgataatgggtttctcgggttttggatccaagaaaaagtga
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