Ceratina calcarata (carpenter bee): 108622391
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Entry
108622391 CDS
T06061
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108622391
09123 Folding, sorting and degradation
03018 RNA degradation
108622391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108622391
03041 Spliceosome [BR:
ccal03041
]
108622391
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108622391
mRNA degradation factors
5'-3' decay
Lsm complex
108622391
Spliceosome [BR:
ccal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108622391
Complex C
U2 snRNP components
108622391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
108622391
NCBI-ProteinID:
XP_017875740
UniProt:
A0AAJ7RWV3
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKHPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQAR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttattcattctttaaatccttaataggaaaggatgtagttgtggagttgaaa
aatgatctaagcatttgtggtactctccactcggtagatcagtacttgaatataaagttg
acagatataagtgtcactgatccagataaacatcctcacatgttgtctgtaaaaaattgt
ttcatccgagggtcagtagtacgttacgttcaattaccaggggacgaagtggatactcag
ttattacaggatgctgcacgcaaagaagcagcagttcaagcaagataa
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integrated database retrieval system
