Castor canadensis (American beaver): 109674678
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Entry
109674678 CDS
T04791
Symbol
Scn2a
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
109674678 (Scn2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccan04040
]
109674678 (Scn2a)
Ion channels [BR:
ccan04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109674678 (Scn2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FraC
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
109674678
NCBI-ProteinID:
XP_020007198
UniProt:
A0A8C0WLS4
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDVPPEMVSEPLEDLDPYYINKKTFIVLNKGKAITRFSATPALYILTPFNPIRK
LAIKVLVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTMFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGAEEKEEGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHKHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETELRKRRSSSYHVSMDLLEDPTSRQRAMSIASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVRESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKGKEGDGTPIKEDILIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKYEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaggag
cgcaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacgttcctccagagatggtgtcagagcccctggaggac
ctggacccctactatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
actcgattcagtgccacccctgccctgtacattttaactcctttcaaccctataagaaaa
ttagctattaaggttttggtacattctttattcaatgttctcattatgtgcacaattctt
acaaactgtgtatttatgacgatgagtaaccctccagattggacaaagaatgtggagtac
acctttacaggaatttatacatttgaatcacttattaaaatacttgcaaggggcttttgt
ttagaagacttcacatttctgcgggatccatggaattggttggatttcacagtcattact
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtcttgagagctttgaaaactatttctgtaatcccaggcctgaagaccattgtgggggcc
ctgatccagtcagtgaagaagctctcagatgtcatgatcttgactgtgttctgcctgagt
gtgtttgctctgattgggctgcagctgttcatgggcaacctgcggaataaatgtttgcag
tggcctccagacaattcttcctttgaaataaatatcacctccttctttaataactcattg
gatgggaatggtaccatgttcaataggacagtgagcatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccggaaggatacatctgtgtgaaggctggtcgaaacccc
aactacggctacactagctttgacacatttagctgggcattcttgtccttatttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacgctgcgtgctgctgggaaaaca
tacatgatctttttcgtgctggtcattttcttgggctcattctacctaataaatttgatc
ttggctgtggtggccatggcctatgaggagcagaatcaggccaccttggaagaggcagaa
cagaaagaggcggaatttcagcagatgcttgaacagcttaaaaagcagcaagaagaagct
caggctgcagcagcagcagcttctgctgaatccagagacttcagtggtgctggcgggata
ggagttttctcagagagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacagaagaaagaaaaagaaacagaaagaacaatctggagcagaagagaaggaa
gaaggagtccgaaaatctgaatctgaagacagcataagaagaaaaggattccgtttttcc
ttagaaggaagtaggctgacatacgaaaaaagattctcttctccacaccagtctttattg
agcatccgaggctcccttttctctccaagacgcaacagtagggcgagcctgttcagcttc
cgaggtcgagccaaggatattggttctgagaatgactttgctgacgatgagcacagtacc
ttcgaggacaatgacagcagaagagactctttgtttgtgccacacaagcatggagaacga
cgtcacagcaatgtcagccaggccagccgcgcttccagggtgctccccatcctgcccatg
aatgggaagatgcacagcgctgtggactgcaatggggtggtgtccctggtcggaggccct
tctgctctcacgtctccagctgggcagctcctgcctgagggtacgactaccgaaacagag
ttaagaaagagacgatccagttcctatcacgtttccatggacttgttggaagatcctaca
tcaagacaaagagcaatgagtatagccagcattttgaccaatactatggaagaacttgaa
gaatccagacagaaatgtccaccttgctggtataagtttgctaacatgtgtttgatttgg
gactgctgtaagccatggttaaaggtgaaacacctggtcaacctggtggtgatggacccg
tttgtggacctggccatcaccatctgcattgtcttgaacacactgttcatggccatggag
cactaccccatgacggagcagttcagcagtgtgctctctgtcgggaatctggtcttcact
ggaatcttcactgcagaaatgtttctcaaaatcattgcaatggatccatattattacttt
caagaaggctggaatatttttgatggttttattgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattatcagttctccgatcgtttcggctgctccgcgtcttcaag
ttggcaaagtcctggcccacgttgaacatgctaataaaaatcattggcaactcagtgggg
gctctgggaaacctcaccttggtgttggccatcatcgtcttcatcttcgccgtggttggc
atgcagctcttcggcaaaagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctcccacggtggcacatgcatgacttcttccactccttcctgatcgtgttccgtgtgctg
tgcggagagtggatagagaccatgtgggactgcatggaggtcgctggccaaaccatgtgc
cttaccgtcttcatgatggtcatggtgataggaaacctagtggttctgaacctcttcttg
gccttgctcctgagttccttcagttctgacaatcttgccgccactgacgatgataatgaa
atgaacaatctacagattgctgtgggaaggatgcagaaaggaattgattttgttaaaaga
aaaatacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatc
aaacctcttgaagatctaaataacaaaaaagacagctgcatatccaaccataccaccata
gaaataggcaaagacctcaactatctcaaagatggaaatggaacaaccagtggcataggc
agcagtgtagaaaagtatgtcgtggatgaaagtgattacatgtcatttataaataatccc
agtctcactgtgactgtacccattgctgtcagagagtctgactttgaaaatttaaatact
gaagaattcagcagcgagtcagatatggaggaaagcaaagagaaactaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggagaacaacctgaggtt
gagccagaagaatcccttgaacctgaagcctgttttacagaagactgtgtgcggaagttc
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaatttgagaaaa
acgtgctataagatagtggagcacaattggtttgaaactttcatcgtcttcatgattctg
ctcagcagtggggctctggcctttgaagatatatacattgaacagcggaaaaccatcaag
accatgttagaatatgctgacaaagttttcacttatatcttcatcctggaaatgcttctg
aagtgggtcgcatatggttttcaagtgtattttaccaatgcctggtgctggctagacttc
ctgattgttgatgtttcattggtcagtttaacagcaaatgccttgggatactcagaactc
ggtgccatcaaatctctcaggacactgagggccctgcgtccactgagagccttatcacga
tttgaagggatgagggttgttgtaaatgctcttttaggggccattccatccatcatgaat
gtgcttctggtctgtctgatcttttggctaatattcagtatcatgggagtgaatctcttt
gctggcaagttttatcattgtattaattatacaactggagagatgttcgatgtaagcgta
gtcaacaactacagtgaatgtaaagccctaatagagagcaatcaaactgccagatggaaa
aacgtgaaagtaaactttgataacgtgggacttggatacctttccctgcttcaagtagca
acatttaagggatggatggatattatgtatgcagctgttgactcaagaaatgtagaattg
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttcattcttcactctgaacctgttcattggtgtcatcatagataacttcaaccagcag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaacctcaaaaacccattcctcgacctgccaacaaa
tttcaaggaatggtctttgattttgtaaccaaacaagtcttcgacatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggagactgatgaccagagtcaagaaatg
accaacattctctactggattaacctggtgttcattgtcctattcactggcgagtgtgtg
cttaaactgatctcccttcgctattactatttcaccatcggatggaatatttttgacttt
gtagttgtcattctctccattgtaggaatgttcctagcagagctgatcgagaaatatttt
gtgtccccgaccctgttccgagtgatccgacttgccaggattggtcgcatcctacgtctg
atcaaaggagcaaaggggatccgcacgctgctctttgctttgatgatgtccctgcctgca
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaacttcgcctatgttaaaagggaagttggaattgatgacatgttcaactttgagacc
tttggcaacagcatgatttgcttgttccaaattaccacctctgcgggctgggatggattg
ctggcacccattctcaacagtggacctccagattgtgaccctgagaaagatcaccctgga
agctcagtgaagggagattgtgggaacccatcggttgggattttcttttttgtcagctac
atcatcatatccttcctggttgtagtgaacatgtacatcgctgtcatcctggagaacttc
agtgttgccactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttttat
gaggtttgggagaagtttgatcctgatgctactcagttcatagaattctccaaactctca
gattttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggacttgcccatggtcagtggagaccggatccactgccttgacatcttattt
gcttttacaaagcgtgttttgggtgagagtggagagatggacgcccttcgaatccagatg
gaagaacgatttatggcatcaaatccttccaaagtttcttatgagcccattacaaccact
ttgaaacgcaagcaagaggaggtgtctgctattgttatccagagagcatacagacgctac
ctcctgaagcaaaaagtgaaaaaggtttcatctatatataagaaagacaaaggcaaagaa
ggagatggaacgcctatcaaagaagatatccttattgataaattaaatgagaattcaact
ccagagaaaaccgatgtgacaccttccaccacttctccaccttcctatgacagtgtgacc
aaaccagaaaaagaaaaatatgaaaaagacaagtcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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