Castor canadensis (American beaver): 109681438 Help Entry 109681438         CDS       T04791                                  Symbol Strc Name (RefSeq) LOW QUALITY PROTEIN: stereocilin   KO K24636   stereocilin Organism ccan  Castor canadensis (American beaver) Brite KEGG Orthology (KO) [BR:ccan00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccan03037]     109681438 (Strc) Cilium and associated proteins [BR:ccan03037]  Other cilia and associated proteins   Stereociliary proteins    109681438 (Strc) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Stereocilin SRCR_2 Motif Other DBs NCBI-GeneID:  109681438 NCBI-ProteinID:  XP_020011803 UniProt:  A0A8B7TW58 LinkDB All DBs Position Unknown AA seq 1768 aa AA seqDB search MALSRWPLLLLLLLSCEVTLIPTGPQSLDPGLSLLKSLLFTLDKSPQSSLSHSRFSAFLA NISSSFELGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDVLALLGQEQ TPRDFLMHQAGVLGGLVEVLLGALVPGGPPTPTRPPCTRDGPSDCVLAADWLPSLLLLLE GTRWQALLQVQPSMDPTNATGLNGREPAPHFLQGLLGLLTPIGELSSEEALWGGLLRTVG PPLYAAFQEGLLRVTHSLQDEVFSILGQPEPDDNGQCQGGNLQQLLLWGIRHNLSWDVQA LGFLSGSPPPPPALLHCLSSGVLLPRASQPLAHIIPRQRRAISLEALCENHSGPAPPYSI SNFSIHLLCQHARPVTPQPPPSTGAICQTAVWYAVSWAPGAQSWLQACHDQFPEQFLDAI CSNLSFSALSGPNRRLVKRLCAGLLPPPTSCPEGLVPVPLTPEIFWGCFLENETLWAERM CVEASLQAVPPRNQAWVQHVCQGPTPDSTAFPPCHIGPCGERCPDGGSFLLMVCANDTMY EALVPFWAWLAGQCRISRGGNDTCFLEGLLGPLLPSLPPLGPSPLCLAPGPFLLAMLSQL PRCQSSVPALAHPTRLHYLLRLLTFLMGPGAGGAETQGMLGQALLLSSLSDNCSFWDAFR PEGRRSVLRTVGEYLEQEQSTPSSFEPTINLGSGISKMELLSCFSPILWDLLQREKSVWA LKILVQAYLHMPPENLQQVVLSAEMEAAQGFLTLMHRSWAQLQVPPSEEQAMGRLTALLL QRYPRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANESVLAAIRDHSSGMRPEQKEALAK RLLXPELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALEDSWPGAGLGPGHAR HVLRSLVNQTVEDGKEQVRRLGSLACFLSPEELQSLVPLSDPMGPVERGLLECAANGTLR PEGRVAYELLGVLRSSGGGDALSPRELRVWAPLFSQLGLRFLQELSEPQLRAMLPALQGT SVTPAQAVLLLGRLLPRQDLSLEELCFLHPLLPGLNLQTLQAIPRRVLVGACSCLAPELS RLSACQTAALLQTFRVKNGVKNMGPTGAGAAVCIPGQPIPTTWPDCLLPLLPLKLLQLDA VALLANRRRYRELPWSEQQAQFLWKKMQVPTNLTLRNLQALGNLAGGMSCEFLQQINSMV DFLDVVHMLYQLPTGVRGSLRTCIWAELQRRMTMPEPELTTLEPELSSLDTKLLLELPIQ MMDRLSTESIMLVVELVQGAPEQLLALTPLHQVALAEKALQNLAPKETPISEEVLVKLGP LVGFLGIESTQRIPLSILLSHLNQLQGFCLGETFATELGRLLLQEPVLGKPELWSQDEVE QVGRLVFTLSMEAISLIPREALGPETLERLLEKQQSWEQSRVGQLCGGPQLTPKKAALVA GIVQPAAEDLPELIPNCADIRGTFPAAWSAMQIAEMELSDFEDCLALFAGDPGLGPEELR AAMGKAKQLWGPPREFRPEQILQLGRLLIGLGERELQELILVDWGVLSTLGQIDGWSSVQ LRVVVSSFLRQSGQHVSHLDFIHLTALGYTLCGLRPEELQHINSWEFSQAALFLGNLHLP CSEEQLEVLAHLLVLPGGFGPVSNWGPEIFTEIGTIAAGIPDLALSALLQGQIQGLTPLA ISAIPAPKFAVVFNPTQLSSLTSVQAVAVTPEQMALLSPEQRRAVAWAQYEGKESPEQQG RSSAWGLQDWSESPWALALLISFVNQLL NT seq 5307 nt NT seq  +upstreamnt  +downstreamnt atggctctgagccgctggcctctgctgctcctgcttctgctgtcctgtgaagtgactttg atccctactgggcctcagtccctggatcctggtctttccctcctgaagtcattgctcttc actctggacaaatctccccagagttcccttagccactcacggttctcggcattcctggcc aacatttcttcttcctttgaacttgggagaatgggggaggggccagtgggagagccccca cctcttcagcccccggccctccggctccatgatttcctagtgacactgagaggcagcccg gactgggagccaatgctagggctgctgggggatgtgctggcactgctgggacaggagcaa actccccgggacttcttgatgcaccaggctggtgtgctgggtggacttgtagaggtgctg ctgggagccttagttccagggggaccccctacccctacacggcccccatgtacccgtgat gggccctctgactgtgtcctggctgctgactggttgccttctttgctgctgttgttagag ggcacacgctggcaggccctgctgcaggtgcagcccagtatggaccccaccaatgctaca ggtctcaatgggagggagccagcccctcattttttgcagggtctgttgggcttgcttacc ccaataggggagcttagctctgaggaagctctttggggaggtctgctacgcacagtgggg ccccccctctatgctgccttccaggaggggttgctccgtgtcactcactccctgcaggat gaggtcttttccattctgggccagccagagcctgatgacaatggacagtgccagggaggt aaccttcaacagctgctgctatggggtatccggcacaacctttcctgggatgtccaggcg ctgggctttctgtctggatcaccacccccaccccctgccctcctgcactgcctaagctcg ggtgtgcttctgcctagggcttcccagcccttagcccacatcattcctcgccaacgacga gccatctctttggaggccctctgtgagaatcactcaggcccagctccgccctacagcatt tccaacttttccatccacttgctctgccagcatgccaggcctgtgaccccacagccccct ccaagcaccggtgccatctgccagacagctgtgtggtatgcagtctcatgggcaccgggt gcccaaagctggctacaagcctgccatgaccagtttcctgagcagtttctggatgcaatc tgtagcaacctctccttttcagctctgtccggccccaaccgccgcctggtaaagaggctc tgtgctggtctgctcccaccccctactagctgtcctgaaggccttgtccctgtgcccctc accccagagatcttctgggggtgcttcttggagaatgagactctttgggctgagcggatg tgtgtggaagcgagtctgcaggctgtaccccccagaaaccaggcttgggttcagcatgtg tgccagggccctaccccggattccactgccttcccaccctgccacattggaccctgtggg gaacgctgtccagatgggggcagctttttactgatggtctgtgccaatgacaccatgtat gaggccctggtgcccttctgggcttggctagcaggccagtgccggataagtcgtgggggc aatgacacttgctttctagaagggctgctgggcccccttctaccttctctgccacctctg ggaccatccccactttgcctggcccctggccccttcctgcttgccatgctatcccagttg ccacgctgtcagtcctctgtaccagctcttgcccaccccacacgcctacactatctcctg cgcttgctgaccttccttatgggtccaggagctggaggggctgagacccaggggatgctg ggtcaggccctgctgctctccagtctctcagacaactgctccttctgggatgccttccgc ccagagggccgacgcagtgtgttgcggacagttggggagtacctggagcaggaacagtca acgccatcaagctttgaacccactatcaaccttggctctggtataagcaagatggagctg ctgtcctgcttcagtcctatactatgggatctgctccagagggagaagagtgtttgggct ctgaagattctagtgcaggcatacctgcacatgcccccagaaaatctccagcaggtcgtg ctttctgcagagatggaggctgcacagggcttcctgacactcatgcatcgttcctgggcc caactgcaggtaccaccatcggaggagcaggccatgggtcgcctgacagccctgctgctc cagcggtacccacgtcttacctcccagctcttcattgacctgtcgccactcatccccttc ttagcagtctctgatctgatgcgcttcccaccatccctgttggccaatgagagtgtcctg gctgccatcagggaccacagctcaggaatgaggcctgaacagaaggaggccttggcaaag cgactgttgngccctgagctgtttggagaagttcctgcctggccccaggaacttctgtgg gcagtgctacccctgctccctcacctccctctggagaactttctacagctcagccctcat cagatccaggccctggaagatagctggccaggagcaggtcttggtccagggcatgcccga catgtgttgcgaagcctggtgaaccagactgtcgaggatggcaaggagcaagtgcgcagg cttgggtcccttgcctgtttcctgagtcctgaggaactgcagagtctggtgcctttgagt gatccaatggggccagtagaacgtggactgctggaatgtgcagccaacgggaccctcaga ccggaaggacgggtggcatatgaacttctgggggtattgcgctcgtctggaggaggagat gcgctaagccctcgggagttgcgggtctgggcccctcttttctctcagttgggcctccgc ttcctgcaggagctgtcagagccccagcttagagccatgcttcctgctctacaggggacc agtgtcacacctgcccaggctgtcctgctgcttggacggctcctccctaggcaagatttg tccctggaggaactctgcttcttgcaccctctgctgccaggtcttaacctccagaccctc caggccatccctaggcgagttctggttggggcctgttcctgcctggctcctgaactgtcg cgtctctcagcctgccagactgcagcactgctgcagacctttcgggtgaaaaacggtgtt aaaaatatgggtccgacaggtgctggtgcagctgtgtgtatccctggtcagcccatcccc accacttggccagactgcctgcttcccctgctcccattaaagctgctacaactggacgct gtggctcttctggcaaaccgaaggcgttatcgggagctgccctggtctgaacagcaggca cagtttctctggaagaagatgcaggtgcccaccaaccttaccctcaggaatctgcaggct ctgggcaacctggcagggggcatgtcctgtgagtttctgcaacagatcaactcaatggta gacttccttgatgtggtacacatgctgtatcaactgcccactggggttcgagggagcctg agaacctgtatctgggcagaactacagcgtagaatgacaatgccggagccagagttgacc actttggagccagaactgagtagtcttgacaccaagctactcctggaattaccgatccag atgatggacagattgtccactgaatctattatgttggtggtggagctggtacaaggtgct ccagagcagctgctggcactgaccccactccaccaggttgccctagcagagaaggcacta caaaacctggctccaaaggagaccccaatctcagaggaagtgctggtgaaattgggcccc ttggtcggattcctggggatagagagcacacaacggatccccctatcgatcctgctgtcc catctcaatcagctacagggcttctgcttaggagagacatttgccacagagctgggacgg ctgctgttgcaggagcctgttcttgggaaaccagagttgtggagccaggatgaagtagag caagttggacgcctagtattcactctgtctatggaggctatttccttgatccccagggag gctttgggcccagagaccctggagcggcttctagaaaagcagcagagctgggagcagagc agagttggacagctgtgtgggggaccacagctcacacccaagaaagcagctctggtagct gggattgtgcagccagctgcagaggatcttccagagctaataccgaattgtgcagacata cgggggacctttccagcagcttggtctgcaatgcagattgcagaaatggaactatcagac tttgaggattgcctggcactatttgcaggagatccaggacttgggcctgaggaattacga gcagccatgggcaaggcaaagcagttgtggggccctccccgagaattccgtcctgagcag atcctacagctggggcggctcttaataggtctaggagagagggagctacaggaactgatc ctggtggattggggagtgctgagcaccctgggacagatagatggctggagttctgtccag ctccgggttgtggtctccagttttctacggcagagtggtcagcatgtgagccacctggac ttcattcacctgacagcactgggttacacactctgtggactacggccagaggagctacaa catatcaacagttgggagtttagccaagcagctctcttcctgggtaacctgcatcttcca tgctccgaggaacagttggaggttctggcccacctccttgtgctgcccggtggctttggc ccagtcagtaactgggggcctgagatcttcactgaaatcggcacaatagcagctggcatc ccagacctggctctttcagcactactgcagggacagattcagggcctgacccctcttgcc atttctgccatccctgctcctaaatttgccgtggtcttcaatcctacccagctatctagt ctcaccagtgttcaggctgtggctgtcactcctgagcaaatggcccttctgagtcctgag cagcgacgagcagttgcatgggcccagtatgagggaaaagagagcccagaacagcagggt cgaagctcagcgtggggcctccaggactggtcagaatccccctgggccctggcattactc atcagctttgttaaccagctgctatga

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