Castor canadensis (American beaver): 109689008
Help
Entry
109689008 CDS
T04791
Symbol
Ift88
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccan03037
]
109689008 (Ift88)
Cilium and associated proteins [BR:
ccan03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
109689008 (Ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_19
TPR_14
TPR_6
TPR_16
TPR_8
TPR_11
ANAPC3
TPR_10
ARM_TT21_4th
TPR_17
TPR-S
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
Coatomer_E
ARM_TT21_2nd
HAT_PRP39_C
TPR_21
DUF6584
TPR_15
ARM_TT21_C
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
109689008
NCBI-ProteinID:
XP_020023247
UniProt:
A0A8B7UVS6
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTFATEELENDTGFQQAVRTSHGRRPPITAKIPSTA
VTRPKATGYGSKTSLHHQXGRPVTGAIHDGVTRPMTAVRAAGFTKAALRGSAFDPLGQAR
GPAPPLETKNEDSPEEKIRQLEKEVNKLVEESCIANSCGDLKLALEKAKEAGRKERVLVR
QREQLTSPENINLDLTYSVLCNLASQYSANEMYAEALNTYQVLVKNKMFSNAGILKVNMG
NIYLKQRNYSKALKFYRMALDQIPSVHKEMRIKIMQNIGVTFIQTGQYSDAINSFEHIMS
TAPNLKAGYNLTLCYYAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVMEAI
KNDLLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYNWCVEVVKASQYVELANDLEI
NKAITHLKQKDYSQAEDTLKVFVKKDSRVKSAAATNLSFLYYLKNELELASSFADLALSA
DRYNPSALSNKGNAVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLIRLDEALD
CFLKLQAILRNSAEVLYQIANIYELMGDRSQAIKWLLQLISIVPTDADILSKLGELYDSA
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTRVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDMGLKEVQEYATKLKRLEKM
KEIREQRIKSGRDGSGGSRGKQDGSAGSDSGQNNSASSEGERLSAKLRALPGTNDPYESS
CNKEIDASYVDPLGPQLERPKTAAKKRLDDDYFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaatgtgcacctggcaccagagacagatgaagatgatctttattctggttat
aacgactacaatccaacctttgctacggaggaattggaaaatgatactggttttcagcaa
gcagtgagaactagtcatggcagaagacctccaataactgctaaaatcccaagcactgca
gttactagacctaaagctactggatatgggtccaagacatccctgcatcatcaanntgga
agaccagtgacaggggccattcacgatggagttactagacctatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcgtttgacccccttggtcaggccagg
ggccctgcacctcctctggaaaccaaaaatgaagacagtccagaagaaaagatcaggcaa
ctagagaaggaagtaaataagttggtagaagaaagttgtattgccaacagttgtggagac
ttaaaattggccttggaaaaagcaaaagaggcaggaagaaaagagagagttctggtgaga
caacgagaacaacttacaagtccagaaaatatcaatttggatttaacttactcagttctt
tgcaacttggccagtcagtattcagctaatgaaatgtacgctgaagcactaaacacctat
caagttctagtgaaaaataagatgtttagcaatgcagggatactgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagctcttaagttctaccgaatggcctta
gatcagatcccaagtgtccataaagaaatgaggattaaaataatgcagaacattggcgtt
acatttattcaaactggtcagtattcagatgccattaattcatttgaacacataatgagt
acagcaccaaatctgaaggcaggctacaacctaactctgtgttattatgccattggagat
cgagaaaaaatgaagaaggcattccaaaaattgattgctgttccattagaaattgacgaa
gatgataaatatatttcgccaagtgatgatccccatactaacttagtgatggaagctata
aaaaatgatcttctcagacaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgcacctgtaattgaaacatcttttgctgtaggttataac
tggtgtgttgaagtagtgaaagcttcccagtatgtagagctggccaatgacctggaaata
aacaaagcgattacacacttaaaacagaaggactatagccaagctgaagacaccttgaaa
gtgtttgtaaaaaaggacagtagagtgaaaagcgcagctgcaaccaacctctccttcctg
tattatctgaaaaatgaacttgaactagccagcagctttgcagatttagccttgagtgcc
gatagatataacccatcagctctttctaataaagggaatgcagtttttgcaaatggtgat
tatgagaaggcagctgaattctataaagaggccctgagaaatgattcttcctgtaccgaa
gcactgtataatcttggcctgacctacaagaagctaatccggctggatgaggctttggac
tgtttcctgaaacttcaagcaattttgagaaacagtgccgaagttctttaccagatagca
aatatatatgaattaatgggagaccgcagtcaagccatcaaatggctcttgcagctaatc
agtattgttccaactgatgctgatattttatctaaacttggagaattatatgacagtgca
ggagataaatcccaggcattccaatattactatgagtcgtatagatatttcccttctaat
attgaagtcattgagtggcttggagcctattacattgacactcagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacaacccacacgagtgaaatggcagctgatg
gtagcaagttgttttagaagaagtggtaactaccaaaaagctttagacacttataaagat
attcacagaaaatttccggaaaatgttgaatgtctgcgtttcttagttcgtctctgcaca
gatatgggattaaaagaagttcaagaatatgccacaaaactcaagaggctggaaaaaatg
aaagaaataagggaacagcgcataaagtcgggcagagatggcagcgggggctctcgtggc
aaacaagacgggagtgctggcagtgatagtggccagaacaatagtgccagtagtgaaggt
gaacgactgagtgccaagctcagagctttacccgggacaaatgatccttatgaaagtagc
tgtaacaaagaaatagatgcttcctacgtggatccgcttggccctcagctagaaagacca
aaaactgcagccaagaaaagacttgacgacgattattttgctgatgaagagttaggagac
gacttgcttccagaataa
DBGET
integrated database retrieval system
