Castor canadensis (American beaver): 109689088
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Entry
109689088 CDS
T04791
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03082
ATP-dependent chromatin remodeling
ccan05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109689088 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
109689088 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccan03036
]
109689088 (Ss18l1)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109689088 (Ss18l1)
GBAF(ncBAF) complex
109689088 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109689088
NCBI-ProteinID:
XP_020023374
UniProt:
A0A8B7UWP2
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MGLSMLPKLVFQTLGPKESSTSASQVLGLQMLDENHHLIQCILDHQSKGKTAECAQYQQL
LHRNLVYLATIADSSQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDAISTGL
PPATLMQGQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPASQSVPMQGQ
GAIGNYVSRTNINMQSNPVSMMHQQAAASHYSSAQGGSQHYQSQSSIAMMGQGGQGSSLM
GQRPMAPYRPSQQGSSQQYLGQEEYYSEQYSHGQGATEPMTQQYYPDGHGDYTYQQSPYT
EQSYDRAFEESTQHYYEGGNAQYSQQQAGYQQGTAQQQTYPQQQYPNQQSYPGQQQGYAP
GVSTGPAQGAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggtctttctatgttgcccaagctggtctttcaaactcttgggcctaaggaatcatcc
acctcagcctcccaagtgctgggacttcagatgctggatgagaaccaccaccttatccag
tgcatcctggaccaccagagcaagggcaagacagctgagtgcgcccagtaccagcagctc
ctccatcggaacctggtgtacctggccacaattgcggactccagtcaaaacatgcagtcc
ctgctccccgctcctccaacccagaacatgaacctgggccccggagcactgagtcagagt
ggatccagccaaggactgcacccccagggtagcctcagtgatgccatcagtacgggcctg
cccccagccaccctcatgcagggccagattggcaatggtccgaaccacgtgtccatgcag
cagacggcacagagcacactgcccaccacctccatgagcatgtcaggcagtggccacggt
actgggcctggctatagccactcaggacctgcctcacagagcgttcccatgcagggccaa
ggtgccattggcaactatgtgtcacggactaacatcaacatgcagtccaacccagtctcc
atgatgcaccagcaggcggccgcgtcccactacagctcagcgcagggcgggagccagcac
taccagagccagtcgtccatcgccatgatgggtcagggcggccaggggagcagcttgatg
gggcagcggccgatggcaccgtaccggccctcccagcaaggctcttcccagcagtacctg
ggccaggaagagtactacagtgagcagtacagccacggccagggtgccaccgagcccatg
acccagcagtactacccagacggtcatggcgattacacctaccagcagtcgccctacacg
gagcagagctacgaccgcgcgtttgaggagtccacacagcactactacgaaggcggaaat
gcccagtacagtcagcagcaggctgggtaccaacagggcacagcccagcagcagacgtac
ccccaacagcagtaccccaaccagcagagctatcctggacagcagcaaggctacgctcct
ggtgtctccacagggcctgcccagggagccccctcgcagtactccagctaccagcaagga
caaggccaacagtacggaagctacagaacatcgcagacagggccctctgcccagcagcag
cggccttatggctatgagcagggccagtatggaaattaccagcaataa
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integrated database retrieval system
