KEGG   Castor canadensis (American beaver): 109692842
Entry
109692842         CDS       T04791                                 
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04151  PI3K-Akt signaling pathway
ccan04510  Focal adhesion
ccan04512  ECM-receptor interaction
ccan04820  Cytoskeleton in muscle cells
ccan04974  Protein digestion and absorption
ccan05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    109692842
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109692842
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109692842
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109692842
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    109692842
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    109692842
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ccan00535]
    109692842
Proteoglycans [BR:ccan00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   109692842
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 109692842
NCBI-ProteinID: XP_020029317
UniProt: A0A8B7VCZ0
LinkDB
Position
Unknown
AA seq 678 aa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NT seq 2037 nt   +upstreamnt  +downstreamnt
atgtggcctttgttccccgcgactccctgcgggaccgcggcgcagccacttctggcccga
aaagcgggacctcgaggccctcctggtccccaaggaccacctgggaagcccggcaaggat
ggcattgatggagaagctggtcctccaggtctgcccgggcccccgggaccaaaaggaacc
ccagggaagcctgggaaaccaggagaggcgggtctgccaggactgcctggtgtggacggt
ctgactgggaaggatggaccccctggacccaaaggcgcccctggagaacggggaaatctg
ggacccccaggaccacctgggctagggggcaagggactccccggaccccctggagaggca
ggagtgagtggcctaccaggtgaaattggccagagaggccccccgggaccctctggactc
ccaggcctgcctggacccccaggacctccaggaccttctggacatcctggggtcctccct
gaaggcgccactgacctgcagtgccctgccatctgcccaccaggccccccaggcccccca
ggaatgccagggttcaagggacccacaggctacaaaggggagcagggcgaagttggtaaa
gatggtgagaagggggaccctgggccccctggacctgctggcaacccaggcactgtgggg
ctacagggctcccgaggattgcgaggactgccagggccactcgggccccctggggaccgg
ggtcccattgggttccgagggccccctggaatcccaggagcaccagggaaagtgggtgac
agaggcgagaggggcccagagggattccgtggtcccaagggtgacctcggcagacctggt
cccaaaggaatccctggggtagctgggccaggtggagagccgggcatgccaggcaaggat
ggccgggatggcatagctggactcgatggcgagaagggagaggctggtcgcaatggtgcc
ccaggagagaagggtcccagtgggctgccaggcctccccggacgagcagggtccaaaggc
gagaagggagaattgggcaaagctggggagctgggtgaggctggcccctctggagagcca
ggcgtccctggagacgttggtgtgcctggggaacaaggcgaggctggtcacaggggctca
gtgggggctcttggcccacaaggccctcctggggtccctggcatccgcggcttccagggt
cggaagggcaacatgggagatcctggccttccaggtccccaaggcctccgaggtgatgtg
ggtgatcggggccctggaggcgctgcaggctctaagggagaccagggtatcgcgggtgcc
gacggccttcccggggacaaaggagagctgggtcccagtggccccgttggacaaaaaggc
gagtctggcagtcgaggggaaccaggccccaaaggcatccagggacccaatggcaccagt
ggtgtccagggtgtccctggccccccagggcccctgggcctccagggcgtgcagggcgtc
cccggcatcactgggaaaccaggagttccgggcaaggaagccagtgagcagcgcgtcagg
gagctgtgtgggggaatgataagtgagcaaattgcacagttagccacacacctgagaaag
ccattagcaccgggctccatcggtcggcctggtccagctggccccccagggcccccaggc
cccccaggctccatcggccaccctggcgctcgagggccccccggatatcgtggtcccact
ggggagcttggagaccctggacccagaggaagccaaggtgacagaggagacaagggtgca
gcaggcgtggggcaggatgggcctgctggggaccaggggctccaagggcctcaaggcgtg
cccggcatcagcaaagatggccgagatggtgctcatggcgagcctgggcttcccggcgac
cctggccttcccggtgccgtaggggctcaggggactccagggatttgtgacacctcagcc
tgccaaggagccatgttaggaggaggtggagaaaagtcaggtcctcggagctcatga

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