Castor canadensis (American beaver): 109692842
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Entry
109692842 CDS
T04791
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04151
PI3K-Akt signaling pathway
ccan04510
Focal adhesion
ccan04512
ECM-receptor interaction
ccan04820
Cytoskeleton in muscle cells
ccan04974
Protein digestion and absorption
ccan05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109692842
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109692842
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109692842
09142 Cell motility
04820 Cytoskeleton in muscle cells
109692842
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109692842
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109692842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccan00535
]
109692842
Proteoglycans [BR:
ccan00535
]
Extracellular matrix (ECM) proteoglycans
Others
109692842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109692842
NCBI-ProteinID:
XP_020029317
UniProt:
A0A8B7VCZ0
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search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NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctttgttccccgcgactccctgcgggaccgcggcgcagccacttctggcccga
aaagcgggacctcgaggccctcctggtccccaaggaccacctgggaagcccggcaaggat
ggcattgatggagaagctggtcctccaggtctgcccgggcccccgggaccaaaaggaacc
ccagggaagcctgggaaaccaggagaggcgggtctgccaggactgcctggtgtggacggt
ctgactgggaaggatggaccccctggacccaaaggcgcccctggagaacggggaaatctg
ggacccccaggaccacctgggctagggggcaagggactccccggaccccctggagaggca
ggagtgagtggcctaccaggtgaaattggccagagaggccccccgggaccctctggactc
ccaggcctgcctggacccccaggacctccaggaccttctggacatcctggggtcctccct
gaaggcgccactgacctgcagtgccctgccatctgcccaccaggccccccaggcccccca
ggaatgccagggttcaagggacccacaggctacaaaggggagcagggcgaagttggtaaa
gatggtgagaagggggaccctgggccccctggacctgctggcaacccaggcactgtgggg
ctacagggctcccgaggattgcgaggactgccagggccactcgggccccctggggaccgg
ggtcccattgggttccgagggccccctggaatcccaggagcaccagggaaagtgggtgac
agaggcgagaggggcccagagggattccgtggtcccaagggtgacctcggcagacctggt
cccaaaggaatccctggggtagctgggccaggtggagagccgggcatgccaggcaaggat
ggccgggatggcatagctggactcgatggcgagaagggagaggctggtcgcaatggtgcc
ccaggagagaagggtcccagtgggctgccaggcctccccggacgagcagggtccaaaggc
gagaagggagaattgggcaaagctggggagctgggtgaggctggcccctctggagagcca
ggcgtccctggagacgttggtgtgcctggggaacaaggcgaggctggtcacaggggctca
gtgggggctcttggcccacaaggccctcctggggtccctggcatccgcggcttccagggt
cggaagggcaacatgggagatcctggccttccaggtccccaaggcctccgaggtgatgtg
ggtgatcggggccctggaggcgctgcaggctctaagggagaccagggtatcgcgggtgcc
gacggccttcccggggacaaaggagagctgggtcccagtggccccgttggacaaaaaggc
gagtctggcagtcgaggggaaccaggccccaaaggcatccagggacccaatggcaccagt
ggtgtccagggtgtccctggccccccagggcccctgggcctccagggcgtgcagggcgtc
cccggcatcactgggaaaccaggagttccgggcaaggaagccagtgagcagcgcgtcagg
gagctgtgtgggggaatgataagtgagcaaattgcacagttagccacacacctgagaaag
ccattagcaccgggctccatcggtcggcctggtccagctggccccccagggcccccaggc
cccccaggctccatcggccaccctggcgctcgagggccccccggatatcgtggtcccact
ggggagcttggagaccctggacccagaggaagccaaggtgacagaggagacaagggtgca
gcaggcgtggggcaggatgggcctgctggggaccaggggctccaagggcctcaaggcgtg
cccggcatcagcaaagatggccgagatggtgctcatggcgagcctgggcttcccggcgac
cctggccttcccggtgccgtaggggctcaggggactccagggatttgtgacacctcagcc
tgccaaggagccatgttaggaggaggtggagaaaagtcaggtcctcggagctcatga
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