Castor canadensis (American beaver): 109695776
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Entry
109695776 CDS
T04791
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
3.6.4.13
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109695776 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccan04054
]
109695776 (Dhx58)
Pattern recognition receptors [BR:
ccan04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
109695776 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
Terminase_6N
AAA_22
Motif
Other DBs
NCBI-GeneID:
109695776
NCBI-ProteinID:
XP_020034083
UniProt:
A0A8C0XNG2
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNVILWLPTGAGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
AQHREEFSRMLGGHWAMTTLSGDMGPRAGFGHMVQHHHLLICTAELLRTALTSTEVEEHV
ELTAFSLIVVDECHHTHKDTIYNVILSRYLEHKLQRTWPLPQVLGLTASPGTGGASKLDG
AIDHILQLCANLDTWRIMSPEKYRPQLQEHNPKPYKQYDLCQKRSQDPFGDLLKKLMSHI
HDHLEMPELNRDFGTQMYEQQVVEMSKDAAEAGLQERRVYALHLRRYNDALLIHDTVRAL
DALATLQDFYNRERITKTQILRAERWLLALFDDKENTLTRLATHGPENPKLEMLEQILLE
QFGSPDNPRGIIFTQTRQSARSLLLWLQQQPGLQRVGIRAQVLIGAGNSSQSTHMTQRDQ
QEVIQKFRGGSLNLLVATSVAEEGLDIAQCSVVVRFGLLTNEIAMVQARGRARAGQSVYS
FVATEGSRELRRELTNEALEALMEQAVAAVQRMDPAEYQAKIQDLQRAALVKRAARAVKR
ENQRQRFPAEHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFLIYYTISREPVVIDRV
FKDWRPGGAISCRNCGEVWGLQMIYKSVNLPALKVRTMLLQTPEGRIHAKKWSRVPFPVA
DFDILQDSTQSLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgaccttaccagtgggaggtgattatgcctgccctggagggcaagaatgtc
atcttatggctccccacgggagccgggaagacccgagccgctgcgtacgtggccaagagg
cacttagaaactgtggatggagccaaggtggtggtactggtaaacagggtgcatctggtg
gcccagcatcgtgaggagttcagccgcatgttgggcggacactgggccatgacaacccta
agtggggacatggggccacgggctggctttggccacatggtccaacaccaccacctgctc
atctgcacagctgagctgctgcggacggcattgaccagcactgaggtggaagagcacgtg
gaactcacagccttctccctgatcgtggtggatgagtgtcaccatacacacaaggacacc
atctacaatgttatcctgagccgctacctagagcataaactgcagaggacatggccctta
ccccaggtgctgggtcttacagcttccccaggcactggcggggcctccaagcttgatggg
gccattgatcacatcctgcagctctgtgccaacttggatacatggcgcatcatgtcacct
gagaagtaccgcccccagctgcaagagcataatccaaagccctacaagcagtatgatctc
tgtcaaaagcgcagccaggacccatttggggacttgctgaagaagctcatgagccacatc
cacgaccacctggagatgcctgagttgaaccgggactttgggacgcagatgtatgagcaa
caggtggtggagatgagcaaggatgcggctgaggcggggctccaggagcggcgggtgtac
gcgctgcacctgcgacgctataatgatgccctgctcatccatgacactgtccgtgccctg
gacgccctggccacgttgcaggatttctacaatagggagcgcatcactaaaacccagatc
ctgcgtgctgagcgctggctgctggcactgtttgatgacaaggagaatacgctgacccgc
ttggcgactcatggtcctgagaacccaaaactggagatgctggaacagatcttgctggag
cagtttgggagcccagataacccccggggcatcatcttcacccagacacgccagagtgct
cgctccctcctgctctggctccagcagcagcctggccttcagagagtgggcatcagggcc
caggtgctgattggggctggcaacagcagccagagcacccacatgacccagagagatcag
caagaagtgatccagaaattccgggggggctcactgaaccttctggtggccacaagtgtg
gcagaggaggggctggacattgctcagtgcagtgtggtggtgcgctttgggctcctgacc
aacgaaatcgctatggtccaggcaaggggccgtgctcgggcaggccagagtgtgtactca
tttgtggcaacagagggcagtcgggagctgcgtcgggagctgaccaacgaggccctggag
gctctgatggagcaggcagtggctgctgtgcagaggatggacccggctgagtaccaggcc
aagatccaggatctgcagcgggcagcactggtcaagcgggcagcccgggcagtcaagcgg
gagaatcagcggcagcggttcccagcagagcacgtgcaactactctgtatcaactgtatg
gtggctgtgggccatgggagtgacctgcggaaggtggagggcacccaccatgtcaacgtg
aaccccaacttcttgatctactacaccatctcccgggagcccgtggtcatcgacagagtc
ttcaaggactggaggcctgggggtgccattagctgcaggaactgtggagaggtctggggt
ctgcagatgatctacaagtcagtgaacctgccagcacttaaagtccgcaccatgcttcta
cagacccctgaaggacggatccatgctaaaaagtggtcccgagttcccttcccagtggca
gacttcgacatcctgcaggactctacccagagcctgtctgatctctccctggattga
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