KEGG   Castor canadensis (American beaver): 109695884
Entry
109695884         CDS       T04791                                 
Symbol
Col6a2
Name
(RefSeq) collagen alpha-2(VI) chain
  KO
K06238  collagen type VI alpha
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04151  PI3K-Akt signaling pathway
ccan04510  Focal adhesion
ccan04512  ECM-receptor interaction
ccan04518  Integrin signaling
ccan04820  Cytoskeleton in muscle cells
ccan04974  Protein digestion and absorption
ccan05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    109695884 (Col6a2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109695884 (Col6a2)
   04518 Integrin signaling
    109695884 (Col6a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109695884 (Col6a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109695884 (Col6a2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    109695884 (Col6a2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    109695884 (Col6a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccan04147]
    109695884 (Col6a2)
   00536 Glycosaminoglycan binding proteins [BR:ccan00536]
    109695884 (Col6a2)
Exosome [BR:ccan04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109695884 (Col6a2)
Glycosaminoglycan binding proteins [BR:ccan00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109695884 (Col6a2)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   109695884 (Col6a2)
SSDB
Motif
Pfam: VWA Collagen VWA_2 YJL171C_Tos1_C MVD-like_N
Other DBs
NCBI-GeneID: 109695884
NCBI-ProteinID: XP_020034246
UniProt: A0A250Y6E4
LinkDB
Position
Unknown
AA seq 1021 aa
MFRCPFSMVLLGGLLGTLYTQQQQLVSPDASIVDRNNNCPEKADCPVNVYFVLDTSESVT
MQSPTDSLLYHMQQFVPQFISQLQNEFYLDQVALSWRYGGLHFSDQVEVFSPPGSDRASF
TKSLQNIRSFRRGTFTDCALANMTQEIRQHVGRGVVNFSVVITDGHVTGSPCGGIKLQAE
RAREEGIRLFAVAPNRNLNEQGLREIANTPHELYRSNYATMKSGSTEIDQDTINRIIKVM
KHEAYGECYKVSCLEITGPSGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPG
PKGVPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGSRGPDGYPG
EAGSPGERGDQGAKGDSGRPGRRGPPGEPGDKGSKGYQGNNGAPGSPGVKGAKGGPGPRG
PKGEPGRRGDPGTKGSPGSDGSKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQG
GLGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPQGPEGG
RGDFGLKGAPGRKGEKGEPADPGPPGEPGSRGPRGVPGPEGEPGPPGDPGLTECDVMTYV
RETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGTIARDPKSETGI
RVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYNKLIKES
RRQKTRVFAVVITDGRHDPRDDDLNLRALCDRDVTVTAIGIGDMFHKKHESENLYSIACD
KPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVAQCTQRPVDIVFLL
DGSERLGEQNFHKARRFVEEVSRRLTLARRDDDPLNARVALLQYGGQREQQVAFPLTSNL
TVIHEALESATYLNSFSHVGAGIVHAINDVVRSSRGGARRHAELSFVFLTDGVTGNDSLE
ESVHSMRKQNVVPTVVAVGSDVDMDVLTKISLGDRAAIFREKDFDSLAQPSFFDRFIRWI
C
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgttccggtgccccttctccatggtcctgctgggcgggctcctggggaccctgtacacc
cagcagcagcagctcgtctcacctgatgcctccatcgtggacaggaacaacaactgccca
gagaaggccgactgccctgtcaacgtgtactttgtactggacacctcggagagcgtgacc
atgcagtcccccacggacagcctgctgtaccacatgcagcagtttgtaccgcagttcatc
agccagctgcagaatgagttctacttggaccaggtggccctgagctggcgctacggcggc
ctgcacttctcggaccaggtggaggtgttcagccctccgggcagtgaccgggcctccttc
accaagagcctgcagaacatccgctccttccgccgtggcaccttcaccgactgcgcactg
gccaacatgacgcaggagatccggcagcatgtgggccgtggagtggtcaacttctctgtg
gtcatcaccgacggccacgtcaccggcagcccgtgcgggggcatcaagctgcaggccgag
cgggcccgcgaggagggcatccggctctttgctgtggcccccaaccggaacctgaacgag
cagggcctgcgtgagatcgccaacaccccacatgagctctaccgaagcaactatgccacc
atgaagtcaggctccaccgagatcgaccaggacaccatcaaccgtatcatcaaggtcatg
aaacacgaagcctatggggagtgctacaaggtgagctgcctggagatcaccggcccctcc
ggccccaagggctatcgtggacagaagggtgccaagggcaacatgggagagccaggagag
cccggacagaaggggcgacagggagatccaggcatcgaaggccccattggattcccagga
cccaagggtgttcctggcttcaaaggagagaagggtgaatttggagccgacggtcggaag
ggagctcctggcctggccggcaagaatggaactgatggacagaagggcaaactgggccgc
attgggcctcctggctgcaagggagaccctggaagccggggacccgacgggtacccaggg
gaagctggaagcccaggcgagcgaggagaccaaggtgccaagggagattctggccgccca
ggacgcaggggacccccaggagaacccggggataaaggaagcaagggatatcaaggcaac
aatggagccccaggaagtccaggcgtgaaaggagccaagggtgggcctgggccccgagga
cccaaaggcgagcctgggcgcaggggagaccctggaactaagggcagtccaggcagtgat
ggctccaagggggagaagggagaccctggccctgaggggcccaggggcctggctggagag
gtcggcaacaaaggagccaagggagaccgaggattgcctggacccagaggcccccagggg
ggtctgggggaacccgggaagcagggatctcggggagaccctggtgatgctggaccccgt
ggagactcaggacagccaggtcccaagggagaccccggcaggcctggattcagctaccca
ggaccccgagggacaccgggagaaaaaggcgagcctggcccccaaggccccgagggtggc
cgaggagactttggcctgaaaggagcacccgggaggaaaggagagaagggagagcctgcc
gaccctggtccccctggtgagcccggctctcgggggccaagaggagtcccaggacctgag
ggtgagcccggaccccctggagaccccggcctcacggaatgcgatgtcatgacctacgtg
agggagacctgcggctgctgcgattgtgaaaagcgctgtggtgccctggacgtggttttt
gtcatagacagctctgagagcattggctacaccaacttcaccctggagaagaactttgtc
atcaatgtggtcaacaggctggggaccatcgccagggaccccaagtcagagacggggatc
cgcgtgggcgtggtgcagtacagccacgagggcaccttcgaggccatccagctggacgac
gagcgcatcgactccctgtccagcttcaaggaggccgtgaagaacctggagtggattgct
ggcggcacctggacgccctctgccctcaagtttgcctacaacaagctcatcaaggagagc
cggcgccagaagacccgcgtgtttgcggtggtcatcacagacggacgccacgacccacgt
gacgatgacctcaacctgcgggcgctgtgcgatcgcgatgtcacagtgacggccatcggc
attggtgacatgttccacaagaagcacgagagcgagaacctctattccatcgcctgcgac
aagccacagcaggtgcgcaatatgaccctgttctctgacctggtggctgagaagttcatt
gacgacatggaagatgtcctctgcccagacccccagatcgtgtgtccagagcttccctgc
caaacagagctgtacgtggcccagtgcacacagcggcccgtggacatcgtcttcctgctg
gacggctccgagcggctgggcgagcagaacttccacaaggcgcggcgcttcgtggaggag
gtgtcacgtcgcctgacactggcacgcagggatgacgaccctctcaacgcccgcgtggcc
ctgctgcagtatggcggccagcgcgagcagcaggtggcctttccgctgacctccaacctg
acggtcatccacgaggcgctggagagcgccacctacctcaactccttctcacacgtgggc
gcgggcatcgtgcacgccatcaacgatgtggtgcgtagctcacgcggtggggctcggcgc
cacgccgagctgtccttcgtgttcctcaccgacggcgtcacaggcaacgacagcctggaa
gagtcagtgcactcaatgcgcaagcagaacgtggtgcccactgtagtggccgtgggcagc
gacgtggacatggacgtgctcaccaagatcagcctgggtgacagggcagccatcttccgc
gagaaggacttcgatagtctggcccagcccagcttcttcgacaggttcatccgctggatc
tgttag

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