Castor canadensis (American beaver): 109696748
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Entry
109696748 CDS
T04791
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04151
PI3K-Akt signaling pathway
ccan04382
Cornified envelope formation
ccan04510
Focal adhesion
ccan04512
ECM-receptor interaction
ccan04518
Integrin signaling
ccan04820
Cytoskeleton in muscle cells
ccan04926
Relaxin signaling pathway
ccan04933
AGE-RAGE signaling pathway in diabetic complications
ccan04974
Protein digestion and absorption
ccan05146
Amoebiasis
ccan05165
Human papillomavirus infection
ccan05200
Pathways in cancer
ccan05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109696748 (Col4a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109696748 (Col4a3)
04518 Integrin signaling
109696748 (Col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109696748 (Col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109696748 (Col4a3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
109696748 (Col4a3)
09154 Digestive system
04974 Protein digestion and absorption
109696748 (Col4a3)
09158 Development and regeneration
04382 Cornified envelope formation
109696748 (Col4a3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109696748 (Col4a3)
09162 Cancer: specific types
05222 Small cell lung cancer
109696748 (Col4a3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109696748 (Col4a3)
09174 Infectious disease: parasitic
05146 Amoebiasis
109696748 (Col4a3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109696748 (Col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccan04147
]
109696748 (Col4a3)
00536 Glycosaminoglycan binding proteins [BR:
ccan00536
]
109696748 (Col4a3)
Exosome [BR:
ccan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109696748 (Col4a3)
Glycosaminoglycan binding proteins [BR:
ccan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109696748 (Col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109696748
NCBI-ProteinID:
XP_020035517
UniProt:
A0A8B7VV29
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MKFIFQGAPAQGEDGEYNGKGDQGFPGIPGFQGLPGPHGFPGPSGPPGLPGFFGFPGAMG
PRGPKGHMGDNMIGQKGEQGTKGLMGPPGSPGTVIVTLTGPDNRTDLKGEKGDKGEMGKS
GLPGPSGLPGEACGSERGAPGEPGPPGKPGKDGAPGFPGTKGAKGNRGFPGLMGEDGIKG
WKGDTGLPGFRGPTEYYDTYHEKGDNGITGPPGPKGARGPQGPTGPSGVPGSPGSSKLGL
RGARGWPGLKGSKGERGPPGKDTVGPPGSLGCPGSPGPPGPPGPPGPPGDTIFRNGPPGD
RGLPGQPGSPGVPGVDGSKGEPGLLCTQCPCIPGPPGLPGLPGLDGVKGIPGGRGAVGVK
GSPGSPGSAGLPGFPGFPGVQGAPGHKGEKGEISQPHGQVGTPGDPGLRGPPGRKGLDGT
PGTPGLKGFPGPQGEPALSGEKGNQGPPGDPGSPGPPGPAGPAGPPGCGPHGEPGPKGTQ
GVSGAPGPPGEAGPKGESSISTPVPGPPGPPGPPGHAGPRGPPGIPGSTGRCNLGLPGPD
GEPGIPGTGFPGPPGPKGDQGFPGTKGSPGYPGQIGEPGFPGEPGFPGAKGEPALARPGE
PGKPGFPGERGNSGENGEIGFPGLPGLPGIPGKEGLDGPQGDPGQPGPPGENGSPGRCIE
GPKGVQGLPGLNGLKGQPGRRGEAGLKGDPGIPGLDRSGFPGEPGPPGIPGHRGEMGPPG
QKGCPGTPGTLGPPGEKGMTGMMGYPGTPGPPGSPGKPGTQGQKGSLGIPGMKGEPGPRG
AKGEQGNKGSPGPSRIAHQKGDKGEPGLKGLTGNPGEKGNRGIPGLPGFKGLEGPPGPSG
PPGPIGDLGRPGNPGEAGPQGMPGNMGNIGVPGSKGKPGTLGLPGLAGRPGLPGIHGLQG
DKGEPGYSEGTRPGPPGPKGDPGLPGDMGKKGERGPPGPPGQSGLAGSEGAPGSPGSPGH
PGKQGPDGDLGLKGIKGFPGPPGIKGPPGLPGFPGSPGPMGMRGDQGHDGIPGPAGEKGE
TGLLGAHPGPRGNPGAQGAKGERGVPGWPGLPGRKGTMGDAGPQGPTGIIGLLGPPGLPG
AIIPGQKGNRGVPGLKGNPGEPGLPGPPGSHAKGIKGDKGLMGQPGSKGPPGTVGDMGPP
GHPGAPGAPGLPGLRGDPGFHGFPGMRGEKGNPGFLGPNGPPGPVGPKGPPGVRGDPGTL
KIISLPGSPGPPGPPGQLGMQGEPGPLGPPGNPGSCGPSGKPGKDGKPGNPGTVGEKGNK
GSKGGQGPPGSDGLPGLKGKPGDMGSPATGMKMGGFVFTRHSQTTKTPSCPEGTEPLYNG
FSLLFVQGNEQAHGQDLGTLGSCLQRFTTMPFLFCNINNVCNFASRNDYSYWLSTPALMP
MDMAPITGRALEPYISRCTVCEGPAMAIAVHSQTTSIPPCPHGWISLWKGFSFIMFTSAG
SEGSGQALASPGSCLEEFRANPFVECHGRGTCNYYSNSYSFWLASLNPERMFRKPTPSTV
KAGELENIITK
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcattttccagggtgctcctgctcaaggagaagatggagaatacaatgggaaa
ggagaccaggggtttccaggaattccaggattccagggtttaccaggccctcatggtttt
cctgggcctagtggcccacctggccttccaggattctttggctttccaggagctatggga
cctagaggacctaagggtcacatgggtgataacatgataggacaaaaaggagagcagggt
acaaaaggattaatgggaccccccggatcaccaggaacagttattgtgacactcactggc
ccagataatagaacggacctcaagggggagaagggagacaagggagaaatgggcaaatct
ggacttcctggaccctcaggactgcctggagaagcatgtggatctgaacggggagctcct
ggggaacctggtccaccgggaaaacctggaaaagatggagcccctggcttccctggcact
aagggagccaaaggcaacaggggcttcccagggttaatgggtgaagatggcattaaggga
tggaaaggggacactggccttccaggatttcgtggtccaacagaatattatgacacatac
catgaaaagggagataatggaatcacaggcccaccagggcccaaaggagctcgtggccca
cagggtcccactggtccctctggagttcctggaagtcctggatcatcaaagcttggcctc
agaggagcccgtggatggccaggtttaaaaggaagtaaaggggagcgaggacccccagga
aaggacacagtggggcctccagggtccctaggctgtcctggttcaccaggccctccagga
ccaccaggacctccaggacctccaggtgataccatttttcgcaacggtccacctggtgac
cgtggactgccaggccagccagggtctccaggagtgccaggagttgatgggtccaaagga
gaaccaggccttctgtgtacacagtgcccttgtatcccagggccccctggtctcccagga
ttgccaggattagatggtgtcaaaggaattccaggaggacgaggtgcagttggtgtaaaa
gggagcccagggtccccaggaagtgcaggtcttccaggatttccaggattcccaggtgtt
cagggagccccaggacataaaggagaaaaaggtgaaatatctcagccccacgggcaagtg
ggcacccctggagatcctgggcttagaggaccaccagggagaaaaggcttggatggaact
cctggaactccaggattaaaaggattcccgggacctcaaggcgaaccggctctgagtggt
gagaaggggaaccagggtcctccaggggatcctggctcccctggacccccaggacctgca
ggaccagctggaccacctggttgtggaccccatggagagccaggtccaaagggcacccaa
ggagtttctggagcccctggaccacctggagaagccggtcctaagggagaatccagtatt
tcaacaccagtcccaggccccccaggacctccaggacctcctggccatgctggcccccga
ggtcctcctggtatccctggatccacgggaagatgtaatcttggtcttcctggacctgat
ggtgaaccaggaatcccaggaactggatttcctgggcctcctggacctaagggtgatcaa
ggttttccaggaacaaaaggatcaccaggttatccaggacagataggagagcctggattt
cctggagagccaggctttccaggagccaagggagaaccagcactagccaggcctggagaa
ccaggaaaaccaggttttccaggagaaagaggcaattctggggaaaatggagaaattgga
ttccctggacttccaggtctccctggaattccaggaaaagaagggcttgatggacctcaa
ggagatccagggcagcctgggccacctggagaaaatggatccccaggaaggtgcatagag
gggcccaagggagtccaaggccttccaggcttaaatggattgaaaggacaaccaggcaga
agaggtgaagcagggttgaagggcgacccaggcattccaggcttggataggtcagggttc
cccggagaacctgggccacccggaatcccaggtcatcgaggtgagatgggcccacctggt
caaaaaggatgtccaggcactccaggaacgttaggaccaccaggtgaaaagggaatgact
gggatgatgggctatcctggaacccctggtcccccggggtctcctgggaagccaggcacg
caggggcagaagggtagccttggaattccaggaatgaagggtgagccaggaccccgagga
gccaaaggggaacaaggaaataaaggaagccctgggccttcccgaatagcccaccaaaag
ggggacaagggagaaccaggactcaaaggacttacaggaaatccaggtgagaaaggaaac
agaggcataccagggctaccaggatttaaaggcctcgaaggaccacctggaccatctgga
ccaccaggccctataggagatctggggaggcctggaaatcctggagaagcaggaccacaa
ggcatgcctggaaacatggggaacataggtgtgccaggttctaaaggaaaaccaggcacc
ttaggactcccgggtctagccggaagaccaggccttccaggcattcatggtctccaagga
gataaaggagagccaggctattcagaaggtacaaggccaggaccaccaggaccaaagggg
gatccaggattgccaggtgacatgggaaagaaaggagaacgagggccacctggcccacct
ggacaatcagggcttgctggatctgaaggagcacctgggagtcctggaagtcctggccac
ccaggaaagcagggtcctgatggtgatttaggtcttaaaggaatcaaaggcttcccaggc
cctccaggaataaaaggccctccaggtcttccaggattcccaggatctcctggaccaatg
ggtatgagaggtgatcaaggacatgatggaattcctggtccagctggagaaaagggagaa
acaggcttgctgggggcccatccaggtccaagagggaatcctggtgctcaaggtgccaaa
ggagaaaggggagtccctggctggcctggcctcccgggcaggaaggggacaatgggagat
gctgggcctcaaggacctacaggaataataggactcctagggccaccaggtctgcctggg
gcaatcatccctggccaaaaaggaaatcgaggtgtacctggtttaaaaggaaatccaggt
gagccaggtctccctggacctccaggaagtcatgcaaaaggcataaaaggtgacaaagga
ttgatgggccaacctggctcaaaaggtccacctggaactgtaggagacatggggccacca
ggtcatccgggagcaccaggtgccccaggtctcccagggctcagaggcgatcctggattc
catggatttccaggcatgagaggagagaaaggtaatccaggatttctaggaccaaatgga
cctccagggccagttgggccaaaaggaccacctggtgtacgtggagaccctggcacactt
aagatcatctcccttccagggagcccagggccacctggcccacctggacaactagggatg
caaggagaacctgggccactggggccaccaggaaacccaggatcctgtggaccaagtggt
aaaccaggcaaagatgggaaaccaggaaatcctggaacagttggagaaaaaggcaacaaa
ggatctaaaggaggtcaaggaccaccgggatcagatggattgccaggtttgaagggaaaa
ccaggagacatgggatcacctgcaactgggatgaaaatgggaggttttgtcttcacccga
catagtcagacaacaaaaactccttcatgtccagaagggacagagccactctataatggg
ttttctcttctctttgtacaaggaaatgaacaagcccatggacaagatcttggaactctt
ggcagctgcctgcagcgatttaccacaatgccattcttattctgtaacatcaataatgta
tgtaattttgcatctcgaaatgattattcatactggttgtcaacaccagctctgatgcct
atggacatggctccaattactggcagggctctggagccttacattagcagatgcactgtc
tgtgaaggtcctgcgatggctatagctgttcacagccaaaccacctccattcccccatgt
ccccatggctggatttccctctggaaaggattttcttttatcatgttcacaagtgcaggt
tctgagggctctgggcaagcactggcatcccccggctcctgcttggaggaattccgagcc
aatccatttgtagaatgtcacggaagaggaacatgcaactactattcaaattcctacagt
ttctggttggcttcattaaatccagagagaatgttcagaaaacctactccatcaactgtg
aaagctggagagctagaaaatataataacaaagtaa
DBGET
integrated database retrieval system
