Castor canadensis (American beaver): 109697199
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Entry
109697199 CDS
T04791
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109697199
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109697199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
109697199
NCBI-ProteinID:
XP_020036238
UniProt:
A0A8B7VXA9
LinkDB
All DBs
Position
Unknown
AA seq
1432 aa
AA seq
DB search
MPLLQILSSTAWEDCMAVEEEGPSRQQLALNLLEMVQQECYRDDHPKLCYRLPFPVTSMC
DSIITAWRILEVMREESAANDWLSSVESLLPVTTVIPMQVFLLLAYLLVEDKGQNLHQIL
KVTTQLAQADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIAQILRVIQL
LGTTPQLRAITLRLLTSLWEKQDRVYPELQRFMAMSDAPSLSVGKELQWEKLIAKAASIR
DICKQRPYQHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALS
PKLSCDTRPLILKTLSELFSLVPSLTVNTAEYEDPVVANAAYKSLSHFSAGEHTILHLPE
KIRPEIPIPAELGGDEDEEDVDLSVPGPCYLRLLSLTAPLVLPALEEFFISLVKQEMANM
PRGIYHSALKGGIRSDQGKTVAGIPNFMLKMYETNKQPGLKPGLAGGMLFCYDIAMYQSK
DGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHHALFLPQAWLAYMNRAYHAILQGRI
GELELQLKHGKEGPEEVQYKSCTAWLWVRDMLTDEITKTAAKESPVVKGNALLALSSLAV
IVSKHEASLSSDSDGVLEAQPNFLPMKEWVSMVLDTLLVIVDNHYQTRGQLFSCFYHKSY
SGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSADDSQAVQIHM
GLALGMFLSRLCEEKLSDISGKQMNLLLMKSLDALENCCFDASLEYNTGCILGVGLVLSL
MSHSSQMESRVHVAASLRKLSAYLDDRGSQSRTFQEVLAYTLSCVCTSAFSAGIIEATEA
EDIMNKLQLLVEKNQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPGWIRIVLAEGTP
TMLCLAALHGMVALVGSEGDAMQLKSEAIQTSHFQSRLNEVIRTLTQVISVSGVIGLQSN
AIWLLGHLHLSTVSSNQSRTSVPTDYSYLPESSFIRAAIGFFITGGKKGPEAVPPSLLKV
VMKPIATVGENYQYPPANWAALLSPLMRLNFGEETQQLCLEIMVTQAQSSQNAAALLGLW
VMPPLVHSLSLNIKKYLLVSVPLWIKHVSDEQIQGFVENLMVAVFKAASPLCNPELCPSA
LQGLSQAMKLPSPTHHLWSLLCEATGKIFDLLPNKIRRNDLELYISIAKCLSEMTDDDAA
RLSPITKNNMEKAAFVKLYLVSQGRFPLMSLTDMLSAAVQHHEKETLAWMILHSLYQARI
VSHANTGVLKRMEWLLELMGYIRNIAYQSTSVQNMAVDEALDFLLLIFAAAVVAWADHES
PLFLGLSASWLPWHQENGLAGPASNFLGRSPMHRVTLQGTLTLLPRSMLLLLQKEPWKEQ
TQKFIDWLFSIMESPKEALSAKSKDIFKATLLSLRVLPEFKKKAVWTRAYGW
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgccccttctgcagatactgtcttctactgcctgggaagactgcatggcagtggaggaa
gaaggtccctctagacagcagttggctctaaaccttctggaaatggtacagcaggaatgt
tacagagatgaccacccaaagctctgctacaggcttccattccctgtaactagcatgtgt
gactcaataattacagcctggaggattctggaagtaatgagagaagaatctgcagcaaat
gactggctgtcttcggtcgagtccttgctccctgttactacagtgatccccatgcaagtt
tttcttctgctggcttacctccttgttgaggataaaggacagaatcttcaccaaatactg
aaggtcaccacacaattagcccaggcagattcctctcaggtaccaaatctgattccagtt
ttgatgttcaaattgggtagaccactggagcctgtgctatacaatgacatattgtacact
ttacctacgcttggtgttcacaaggtgtgcatagcacagatcctgcgagtaatccaactg
cttggaaccaccccacagctgagagccatcactctgcgcctattgacgtctttgtgggaa
aagcaggatcgtgtatatcctgaacttcagcgttttatggccatgtctgatgcgccttct
ctctctgtgggcaaggaactccagtgggagaaattaattgcaaaagcagcttcaatccga
gatatatgcaagcaaaggccctatcagcatggtgcagacatgctggcagctatttctcag
gtgctgaatgaatgtaccaaacctgaccaagctactccagcagccttggtgttacaaggc
cttcatgcactctgccaagcagaggttgtttgtattcgctccacttggaatgctctctct
ccaaagttgagttgtgacacaagacctctcattttgaagacgctgagtgaactgttttct
ctagttccttccttaacagtcaatacagctgaatatgaggacccagttgtagcaaatgca
gcatataaatctctgtcccactttagtgcaggagaacacaccattcttcaccttcctgaa
aagattagaccagaaattcccattcctgctgagttaggtggcgatgaagatgaggaagat
gtggatctttcagttcctggcccttgctatctcagactcctgtcactcactgctcccttg
gttttaccagctttagaagaattttttatatcccttgtgaagcaagaaatggcaaatatg
ccccgtgggatatatcactctgcattaaaaggaggtatccgctcagaccaaggaaagact
gtggcaggaatccccaattttatgttaaagatgtatgaaacaaacaagcaaccaggattg
aaacctggtcttgcaggtggtatgttattttgctacgacattgccatgtaccagagtaaa
gatggaaaaccattgaatcgattgatggccagtagagggcgaagtttcaagcagacctcc
cttgcccttgtacatgaggtccacatccagctttcagaatggcaccatgcactttttctt
ccacaagcatggcttgcatatatgaatcgagcttatcatgccattttacagggaagaata
ggagagctagagctgcagttaaaacatggaaaagaaggacctgaagaggtacaatacaaa
agctgcacagcctggctttgggtcagagacatgttgactgatgagatcaccaagacagct
gcaaaggagagtccagtggtcaaaggcaatgcgctgttagccctaagcagccttgccgtc
atcgtatccaaacatgaagccagcctctcctcagactctgatggggtcctggaggctcaa
cctaatttccttccaatgaaagagtgggtttccatggtgcttgatactctcctagtcatt
gtggataaccattaccaaaccagaggacaactcttctcctgcttttatcataaatcctat
tctggtgaaaacacagctagtgccattgcccgttctgctgccgccacggctttgtctctc
cttgtgccagttttcattatctcttgcaaagagaaggttgaggaaatcctgaacatgctg
actgccaggttacctgggaaaccaagtgctgatgactctcaagccgtgcaaatccacatg
ggccttgctttggggatgtttctctcacgcctgtgtgaggagaaactcagtgatatatct
ggtaaacagatgaaccttcttctgatgaagtctttggatgccctggaaaactgctgcttc
gatgctagtcttgaatacaacaccggctgtatattgggagttggacttgttctgtccctc
atgagccacagcagccaaatggaatcccgagtacatgtggcagcatcacttcggaagctg
tctgcatatctagatgacagggggagccagagcaggacatttcaggaggtcctcgcctac
acccttagctgtgtgtgtacatcagcgttcagtgctggcattattgaggctacggaggct
gaagacattatgaacaagcttcaactgttagtagagaagaaccagcagacttcaggtttt
gccctggcattaggaaacatagttcatggtttatctgtgtgcggacatggaaaagctgaa
gacttgggcagcaaacttctccctggttggatcagaattgttctagcagagggcactccc
acaatgctgtgtctggcagcccttcatggcatggtagccttggtaggctctgaaggggat
gcaatgcagctgaagtcagaagccatccagacgtctcattttcaaagcagacttaatgaa
gtcataagaaccttaactcaagtcatcagtgtctctggggtgattggtcttcagtcaaat
gcaatctggcttctaggacatctccatctatctactgtgtcctcaaatcaaagtagaacc
tctgttcctacagactacagctatttgcctgaaagcagttttattagagcagccattggc
ttcttcattacaggaggcaaaaaaggtcctgaagctgtgcctccttctcttctcaaagta
gtgatgaaacccatagcaactgttggcgaaaactaccagtatcctcctgcaaactgggcc
gcactcctctctccacttatgagactaaattttggtgaagagacacagcaactgtgcctg
gaaattatggtgacgcaagcacagtcatcacagaatgcagctgccctgctgggcttatgg
gtgatgccaccacttgtccacagtctcagtctgaatatcaagaaatacctcctggtatct
gtgcctctgtggataaaacacgtctctgatgaacagatccaggggtttgttgaaaaccta
atggtggcagtttttaaagcagcttctccactttgtaaccctgaattatgcccaagtgcc
ttacagggtctgagccaggccatgaaactgcccagccccacccatcacctctggagtctt
ctctgtgaagctactgggaaaatttttgaccttctgccaaataagattcggagaaatgat
ctagagctatatattagtatagcaaaatgcctctcggaaatgacagatgatgatgccgct
cggctttccccgattacaaagaataacatggaaaaggctgcctttgtcaagctgtactta
gtctctcaaggacggttccccttgatgagcctgactgatatgctcagtgctgctgtgcag
caccatgagaaagaaacactggcctggatgattctgcacagcttataccaggcacggatt
gtgagccatgccaatacaggggtgctgaagagaatggagtggctcttggaactgatgggt
tatatcagaaatattgcttaccagtcaacatctgttcagaacatggctgttgatgaggct
ttggatttcttgttactgatatttgcagctgcagtggtagcttgggcagaccacgagtct
ccactcttccttggccttagtgccagctggttgccatggcatcaggagaatggcctggct
gggccagcatcaaacttccttggcagaagtccaatgcatagggtcactctgcaggggact
ctcactctccttcccaggagcatgctgctgctgctgcagaaagagccatggaaggaacag
acccagaagttcattgactggctattcagcatcatggaaagtcctaaagaagccctctca
gcaaagtccaaggacatttttaaagccaccctgctgtccttgagagttctcccagagttt
aagaagaaagccgtgtggaccagagcatatggttggtga
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