Castor canadensis (American beaver): 109698371
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Entry
109698371 CDS
T04791
Symbol
Papd5
Name
(RefSeq) LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109698371 (Papd5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109698371 (Papd5)
03016 Transfer RNA biogenesis [BR:
ccan03016
]
109698371 (Papd5)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109698371 (Papd5)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109698371 (Papd5)
Transfer RNA biogenesis [BR:
ccan03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109698371 (Papd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF4283
Motif
Other DBs
NCBI-GeneID:
109698371
NCBI-ProteinID:
XP_020038112
UniProt:
A0A8B7W2E6
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLVVFGXWENLP
LWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDF
TKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYG
VLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDV
GRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTDEVATYRDWISK
QWGLQSRPEPSCNGPVSSSSATQSSSSDVDSDATPCKTPKQLLCRPSTGNRVGSQDVSLE
SSQTVGKIQSTQTTNTSNNTNKSQHGSTRLFRSSSKGFQGTAQTSHGSLMTNKQHQGKSN
NQYYHGKKRKHKRDTPLSDLCR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagacctgaggaggagaagatgcgaatggaggtggtgaacagaattgagagt
gtgatcaaggagctctggcccagtgctgacgtccagatatttggaagttttaaaactggc
ctgtatttacctacaagtgacatcgatcttgtggtgtttgganagtgggagaatctgccc
ctctggaccctggaagaagctcttcggaaacacaaagttgcagacgaggattcggtgaaa
gttctagacaaagcaactgtgcctattattaaattaacagattcttttactgaagtgaaa
gttgatatcagctttaatgtccagaatggcgtgagagcagcggacctcatcaaagatttt
accaagaaatatcctgtattgccatatttggttttagtattgaaacaattcttactacag
agggaccttaatgaagtatttacaggtggaattggttcttatagtctctttttaatggca
gtcagtttccttcagttacatcccagggaagatgcttgcatccccaatacaaactatggt
gttctcttgatagaattttttgaattatacggacgacacttcaattatttaaagactggc
atccggataaaggatggtggttcatatgtggccaaagatgaagtacagaaaaatatgctt
gatggctataggccatcaatgctttatattgaagatcctttacaaccaggtaatgatgtt
ggaaggagctcatacggggccatgcaagtgaaacaggcctttgattatgcctatgttgtt
ttgagtcatgccgtatcaccaattgcaaagtactatcccaacaatgaaacagagagcata
ttaggtagaataattagagtgacggatgaagttgccacatatagagactggatatcaaag
cagtggggcttgcagagtaggcctgagccttcatgcaatggtccagtgtcctcttcttct
gccacgcagtccagctctagtgatgtcgattccgatgcgacaccatgcaaaaccccaaaa
cagctgctctgtcgtccgtccactgggaaccgagtggggtcacaagatgtgtccttggag
tcctctcagacagttgggaaaatacagagcacccaaaccactaacacatccaacaacacc
aataaatctcagcatggatcaacgaggctctttcgttcttccagcaaaggcttccaaggt
acagctcaaacaagccatggttccttgatgacaaacaaacaacatcaaggcaaatccaat
aatcagtattaccatggcaaaaagaggaaacacaagagggacacgcccctctcagacctt
tgtagatag
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