Chryseobacterium capnotolerans: H5J24_05890
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Entry
H5J24_05890 CDS
T08205
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao01501
beta-Lactam resistance
ccao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H5J24_05890
01503 Cationic antimicrobial peptide (CAMP) resistance
H5J24_05890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccao02000
]
H5J24_05890
01504 Antimicrobial resistance genes [BR:
ccao01504
]
H5J24_05890
Transporters [BR:
ccao02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H5J24_05890
Antimicrobial resistance genes [BR:
ccao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H5J24_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UHO39613
LinkDB
All DBs
Position
complement(1313554..1316715)
Genome browser
AA seq
1053 aa
AA seq
DB search
MFKKVIHRPVFAIVISVVILFIGGLAMKQLPTEQFPKIAPTTVAVSIAYPGASADVLVKS
SLITIENAINGVQGMRYITTDATSAGEATVNVVFDPGTDPNEAVVLVKTRVDQVMPLLPE
LVQKEGVVVNPIQPSMLMYVNLYSTNKSMDEKFLYNYSMVNIIPEINRIHGIARSQILGS
RRYAMRIWLNPDRMRAYDISVDEVMKAISEQSIIGRPGRIGQSSGIAAQSLEYVLTYKGQ
YNKPEEYENIIIRSNAEGENVKLKDVAKIELGSEFFDIYSNLDGHPSASIVLKQNYGSNA
NDVIKDVKAKLAEMKGNFPPGVDYKISYDVSQFLDASIEQVIHTLRDAFILVAIVVFIFL
GDWRSTLIPIIAVPVSLIGTFFVIQLFGLTINLVTLFALVLAIGIVVDNAIVVIEAVHAK
MEESNISPYKAVKEVMGEIAGAIIAITAVMVAVFIPISFMTGPVGTFYRQFSITMASAIV
ISAVVALTLTPVLAAMLLKNNHGKPKKSNIFTKSLDAFNNGFDKVTGKYASFLRKIVNRK
VVTWGILAAFCAGIFVINKVLPGGFIPNEDQGTIYAIIQTPPGSTLEQTNKISRALQKIA
MGVDGVESVSSLAGYEIMTEGRGSNAGTCLINLKSWNDRKHSVKEVMEELENKSKDLGAT
IEFFEPPAVPGFGSSGGFSMRLLDLNRTTNYQDFDKVNKDFITQLKKRKELTGVFTFFAA
NYPQYELVFDNNAAMQKGVSIGKAMENLNILIGSTYEQGFIRFGQFFKVYVQSSPEFRRL
PTDIMNLYVKNDRDEMVPYSAFMTMKKTQGPNEITRYNMYNSAAVRGLPAPGYTTADAIQ
AINETAAKSLPHGYKVAWEGLSYDEAQRGNEAIYVFLVVLVFVYLVLAAQYESFLIPFAV
LCSLPVGVFGSFLLLKLMGLENDIYAQVGLIMIIGLLGKNAVLIVEFAVKRRQAGDSILE
AAVEGSKARFRPILMTSFAFIAGLVPLVFARGAGAIGNHTIGASSLGGMLIGTLFGVIVI
PGLYYIFAKWSDGKKMIKDEDESPLSEDMIHYE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagtaatacaccgaccggttttcgctattgtgatctcggttgtcatcctg
tttataggagggcttgcgatgaagcagcttcctacagaacagtttccaaaaattgcaccc
acaacagttgccgtttctattgcataccctggagccagcgcagatgtattggtaaaatct
tccctgattaccattgaaaatgccattaacggagtccaaggaatgcgttacatcactaca
gatgctaccagtgccggagaagctactgtgaacgtggtctttgatcccggaacagacccg
aatgaggctgtagttcttgtaaaaacaagagttgaccaggtaatgcctttattaccggaa
ctggtacaaaaagaaggggttgtagtaaaccccatacagccaagtatgctgatgtatgtt
aatctttacagtacgaataaaagtatggatgaaaaattcctttacaattattccatggtt
aatattattccggaaatcaaccgtattcatggtattgcaagatctcagatcctgggaagc
cgaagatatgcgatgcgtatctggctgaatcctgaccgtatgagggcttatgatatttct
gtagatgaagtcatgaaagccattagtgagcaaagtattatcggccggccgggaagaatc
ggccagagttccggtattgcggcacagtctctggaatatgtattgacctacaaaggacaa
tacaacaagcctgaagaatatgaaaatattatcattcgttccaatgctgaaggggaaaat
gttaaattaaaagacgtcgccaaaatagaattgggcagtgaattttttgatatttattcc
aatcttgacggacatccatctgcttctatcgttttaaaacaaaattatggaagtaatgcc
aatgatgtgatcaaagatgtgaaagctaagcttgccgaaatgaaagggaacttccctcct
ggtgtagattataaaatcagttatgacgtttcgcagtttcttgatgcttccattgagcag
gtaatacatacattgagagatgcatttattcttgtagccattgtagttttcatttttctt
ggtgactggcgttctaccctgatccctattattgctgttccggtttctttgattggtact
ttctttgtcattcagctttttggattaaccatcaaccttgttaccctgtttgccctggta
ttggcgatcggaattgtggttgataatgcgattgttgttattgaagccgttcacgccaag
atggaggaaagcaatatttctccttataaagcagtgaaagaagtaatgggtgaaattgca
ggagctattattgccatcactgccgtaatggtagcggtatttattccgatttcatttatg
acaggtccggtgggaacattctaccgtcagttttccattacgatggcaagtgctattgtt
atttcggctgttgttgctcttaccttaacgcctgtcttggctgcgatgttactgaaaaac
aatcatggaaaacctaaaaaatcgaatattttcacgaaatctttagatgcatttaacaat
ggatttgataaagtcactggaaaatatgcctcatttcttagaaagattgtcaacagaaaa
gtagtaacatggggaatccttgctgccttttgtgctggaatttttgtaattaataaagta
cttcccggaggcttcattcctaatgaagaccagggaactatctatgccattattcagact
cctccgggatctacattggaacaaaccaataaaatttccagagctttgcaaaagatcgca
atgggagtagatggtgtagaatcggtatcttctctggctggatatgaaattatgacagaa
ggacgcggttctaacgcaggaacctgtctgatcaaccttaaaagctggaatgaccgtaag
cattctgtaaaggaagtcatggaagaactggaaaataaatcaaaagatcttggagctact
attgaattctttgaaccacctgctgttcccggatttggttcttccggaggattctctatg
agattgcttgaccttaacagaactaccaattatcaggatttcgataaggtaaacaaagac
tttatcacccagctgaaaaagcgtaaagaacttacaggagtgttcacattctttgccgcc
aattatcctcaatatgaactggtatttgataataatgctgcgatgcagaaaggagtttct
attggaaaagccatggaaaacctcaacattctaattggtagtacctatgagcagggcttt
attcgtttcgggcagtttttcaaagtgtatgtacagtcttccccggagttcagaaggctt
ccgacagacatcatgaatctatatgtaaaaaatgaccgtgatgaaatggttccttattcc
gcatttatgacgatgaaaaagactcaaggtcctaacgagatcacccgttataacatgtat
aattctgctgcagttcgtggtcttcctgcaccgggatatactacagcagatgctattcag
gccattaatgaaacagctgctaaatctcttcctcacggatataaagtagcctgggaagga
ttatcttatgatgaagcacaacgcggtaacgaagctatttatgttttccttgttgtcctt
gtattcgtatatcttgtactcgcagcacaatatgaaagtttccttattccgtttgcagta
ctttgttctttacctgtaggggtattcgggtccttcttactattaaaattaatgggactg
gaaaatgacatctatgctcaggtaggactgattatgattatcggattactcggtaaaaat
gcagtacttattgtagaatttgccgtgaaaaggcgccaggccggagattcgattcttgaa
gcagcggtcgaaggctctaaagcccgtttcagacctatcttgatgacttcatttgcattt
atagcaggtttggttccgctcgtatttgcgagaggtgcaggagcgattggaaaccacacc
attggggcatcctcattgggaggaatgttgataggaaccttatttggagttattgtaatt
ccgggactgtactacatatttgccaagtggtctgacggtaaaaaaatgattaaagacgaa
gatgaatctccattaagcgaagacatgatccattatgaataa
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