Clavibacter capsici: AES38_00010
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Entry
AES38_00010 CDS
T05227
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ccap
Clavibacter capsici
Pathway
ccap03030
DNA replication
ccap03430
Mismatch repair
ccap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AES38_00010
03430 Mismatch repair
AES38_00010
03440 Homologous recombination
AES38_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccap03032
]
AES38_00010
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_00010
Enzymes [BR:
ccap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AES38_00010
DNA replication proteins [BR:
ccap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AES38_00010
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AES38_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ALD11566
UniProt:
A0AA86GBS3
LinkDB
All DBs
Position
2009..3160
Genome browser
AA seq
383 aa
AA seq
DB search
MKFQVNRDVFSEAVSFAVKLLPQRTTLPILSGVLIEATEDGLTLSSFDYEVSARTQIQAD
IEESGRVLVSGRLLADIANRLPNAPVRFTTDESKITVSCGSAHFTLLSMPVEEYPTLPQI
SEQSGLLPAEQFAAAVSQVAVAASRDDVTPVITGVQLEVGESSLGLIATDRYRVAVREID
WDGGDSGNDGTSRTALVPARTLQEIGKTFGHSGTISVAITDTDDRQLIAFSADRKTVTSL
LIRGNFPPVKRLFPETVDNYAVINTADLIEATRRVQLVLEREAALRFTFTIDGLTLEAIG
SEHAQASESIDALLTGVDTVVSLKPQFLLDGLGAVHSEFVRLSFTKTDNPNKPGPVLITS
QSSKDQAGADNYRYLLQPNLLLR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttccaagtcaacagggacgtcttcagcgaggcggtgtccttcgccgtcaagctc
ctcccgcagcgcacgaccctgccgatcctgagcggtgtgctcatcgaggcgaccgaggac
gggctgacgctgtcgtcgttcgactacgaggtctccgctcgcacgcagatccaggcggac
atcgaggagtccgggcgggtgctggtctccggtcggctcctggcggacatcgccaaccgc
ctgccgaacgcaccggtgcgattcaccaccgacgagtccaagatcaccgtctcgtgcgga
tccgcgcacttcacgctgttgagcatgcccgtcgaggagtacccgacgctgccgcagatc
tccgagcagtccgggctcctccccgccgagcagttcgccgccgccgtctcgcaggtggcc
gtcgcggcgtcccgcgacgacgtcacccccgtcatcaccggcgtccagctcgaggtgggg
gagagcagcctcggactcatcgccacggaccgctaccgcgtcgccgtgcgcgagatcgat
tgggacggtggcgactccggcaacgacgggaccagccgcacggcgctcgtgccggcccgc
acgctgcaggagatcggcaagaccttcggccacagcggcacgatctcggtggcgatcacc
gacacggacgaccgtcagctcatcgcgttcagcgccgacaggaagaccgtcacctcgctg
ctcatccgcggcaacttcccgccggtcaagcgcctgttccccgagacggtcgacaactac
gcggtcatcaacaccgcggacctcatcgaggccacccgccgcgtccagctcgtgctggag
cgcgaggcggcgctgcgcttcaccttcaccatcgacggcctcaccctggaggccatcggc
tccgagcacgcgcaggcatcggagagcatcgacgccctcctcaccggcgtggacaccgtg
gtctcgctcaagccgcagttcctgctggacggcctgggtgccgtccactccgagttcgtc
cgcctgtcgttcacgaagacggacaacccgaacaagcccggtccggtgctgatcacgagt
cagtcgtccaaggaccaggctggggcagacaactaccggtacctgctgcagcccaacctg
ctgctccgctag
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