Campylobacter californiensis: CCAL_0037
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Entry
CCAL_0037 CDS
T10527
Symbol
kpsF
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ccaq Campylobacter californiensis
Pathway
ccaq00541
Biosynthesis of various nucleotide sugars
ccaq01100
Metabolic pathways
ccaq01250
Biosynthesis of nucleotide sugars
Module
ccaq_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ccaq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CCAL_0037 (kpsF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccaq01005
]
CCAL_0037 (kpsF)
Enzymes [BR:
ccaq01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
CCAL_0037 (kpsF)
Lipopolysaccharide biosynthesis proteins [BR:
ccaq01005
]
Lipid A
CCAL_0037 (kpsF)
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
QCD49976
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All DBs
Position
complement(39582..40541)
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AA seq
319 aa
AA seq
DB search
MNLIEVAKEVLRIEGNELLRQADKLGAEIENAVNLIHSIKGKVIITGVGKSGHIGAKIAA
TLASTGTSSFFLHPTEAMHGDLGMIGKDDLVLAISFSGESDELIKILPHVKRFGVKIIGM
TKNLDSSLGKFSDVVLALDIVSEACPLNAAPTTSTTLTLALGDALAVCLMQKRNFKAEDF
ANFHPGGSLGKRLFVKVKDVMKTQNLPIVSEDVSIKNAIDTMTHGKLGNVLLTNKDGVLV
AILSDGDLRRALMDENFNINEQAIKYATKNPKVLDNENILAIDALSIIEEYKIQLLVVLN
GGKIAGVLHIHDLTGLGLK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaatcgaagtcgcaaaagaagttttacgaatagaaggcaatgagcttttaaga
caggctgataagctaggtgcggagatagaaaatgccgtaaatttgatccattcgatcaag
ggcaaggttataatcacgggtgttggcaaaagcggtcatatcggcgctaagatcgctgcg
accctagcaagcacaggcacgtcaagcttctttttacatcctacggaggctatgcacggc
gatcttggcatgataggcaaggatgatttggttcttgcgattagctttagcggagagagt
gacgagctaattaaaattttaccccatgtgaaaagatttggcgtaaagatcataggcatg
actaaaaatttagatagttcgcttggtaaatttagcgatgttgttttagctcttgatatc
gttagcgaggcatgtcctttaaatgcggctccaacaacctcaacgacgctaactctggca
ttaggagacgctttagccgtttgcttaatgcaaaaaagaaattttaaagcagaggatttt
gcaaatttccaccctggtggctctcttggcaaaagactttttgttaaagttaaagacgtc
atgaaaacacaaaacctacctatcgttagcgaagatgttagtattaaaaacgctatagat
acgatgacacacggtaagctaggcaacgtcttgctaactaacaaagacggagtgttagtt
gccatacttagtgatggtgaccttagacgtgcgttaatggatgaaaatttcaatatcaac
gaacaagctataaaatacgccactaaaaatccaaaggtgctggataacgaaaatatcctg
gctatcgatgcacttagcatcatcgaagagtataaaattcaacttctagtcgtgttaaac
ggcggcaagatagccggtgttttacatatacacgacctaaccggcttaggactaaaataa
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