Cyprinus carpio (common carp): 109046273
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Entry
109046273 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04020
Calcium signaling pathway
ccar04510
Focal adhesion
ccar04518
Integrin signaling
ccar04540
Gap junction
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109046273
04020 Calcium signaling pathway
109046273
09133 Signaling molecules and interaction
04518 Integrin signaling
109046273
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109046273
04540 Gap junction
109046273
09142 Cell motility
04810 Regulation of actin cytoskeleton
109046273
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccar01001
]
109046273
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccar04090
]
109046273
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
109046273
Protein kinases [BR:
ccar01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
109046273
CD molecules [BR:
ccar04090
]
Proteins
109046273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_VEGFR-1-like_5th
C2-set_3
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
109046273
NCBI-ProteinID:
XP_042593863
Ensembl:
ENSCCRG00000015377
UniProt:
A0A9Q9X266
LinkDB
All DBs
Position
B14:complement(7803079..7826640)
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AA seq
1069 aa
AA seq
DB search
MKSFSRSQLTAMTTGLLLLCLGSSGLELSPSISQEVLSINSSFSITCSGWNDVTWSFKRD
EKVPEFHVEKPSSSSSVLRLEQVTWRHTGVYVCSENGTDETREVAIFVPDPEVWFLENDH
LMVTKTREEGTIPCPVTNPRINVTLYESDSETMVEGSYNPSVGFTAALEDRTYKCKGELN
GEEKESISFYVFSIFAPDALDPYINASKTVLKQGETLNVNCTVHGVELVFFSWDFPHKDV
GDIEPLTDILSSMSMRSFLNITDVSVDRSGQYVCHVHEGVQNQRASASINITVLEKGFVA
LSSHLGRNVSAQLGENVELKVEIEAYPKPSVQWTKDGAAIRGHSTRQEQETGFVSTLTLV
RIRLEQMGLYTVTVQNQDDIKEMSFDLEVKVPPQITELSDHQLPGKKHAVTCVAEGVPSP
SIQWFSCDHMPKCSNRSVAWSPLVEDPEKVTIQTNVSYNITRKIHQVHSQVTLLRPQLLT
IRCEARNERGARARDPEVTSEXLVSFFSQVAVLAAVLALVVIAIISIIILIAVWRKVKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMSRDSLVLGRTLGSGAFGRVVEATAYD
LGHSQSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKNGPLYLVT
EYCRYGDLVDYLHRNKHSFLQYYADKNHIVNGSQICNDSDMPTGKEYVSFGSECDGGYMD
MTIDKQTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPVLSYT
DLVGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKG
STFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGY
RMAKPSYASEDVYEVMRKCWDEKFEKRPEFSFLVHTMGNMLSDGYKKKYSQVSDSFLKSD
HPAVARVKPCVPSPFPNAFPPQSPSSDLSPNPTPRPQADGEPHNEYIIPIPDPKPEEETQ
DEPVLMEIPSSSLSSDEETVSMETPSTEPEHEELLPDHSGSPEVEESFL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcagccggtcccaactgactgccatgacaacaggtttgctcctgctctgt
ctgggtagctcaggtctggagctcagtcccagcatctctcaggaagtcctctccatcaac
tcctccttcagcatcacctgctccggctggaacgacgtcacctggagcttcaagcgggac
gagaaagtgccggagttccacgtcgagaagccaagttcctcctccagcgttctccgtctg
gagcaggtgacgtggagacacacgggcgtttatgtgtgttcagagaacgggacagacgag
accagagaggtggccatctttgtgcctgatcctgaggtgtggttcctggagaacgatcat
ttaatggtgactaagacgagagaagaaggcacgatcccatgtccggtgacaaatccccgg
ataaacgtcacgctgtacgagagtgactcagagacaatggtggagggttcgtacaacccc
agcgtgggcttcaccgccgccctggaggacagaacctacaaatgcaaaggagagctaaac
ggagaggagaaagagtccatcagcttctatgtcttcagtatatttgctcccgatgctctg
gatccctacatcaacgcctccaaaacggtcctgaaacagggcgagacgctgaacgtcaac
tgcaccgttcacggcgtggagctcgtcttcttctcctgggactttccccacaaagacgtg
ggagacattgagcccttgactgacatcctgtcgtccatgagcatgcggtcctttctcaac
atcacagacgtgtctgtggacagatcaggacagtatgtttgtcacgtgcatgagggtgtg
cagaaccagagagcttcagccagtattaacatcactgtactggagaaaggattcgtggct
ctttcttcacatctgggtaggaacgtctcagcacagcttggagaaaacgtggagctgaag
gtggagatcgaggcatatcccaaacccagcgtgcagtggactaaagacggcgctgctatc
agaggacacagcaccagacaggaacaagagaccgggtttgtcagcacactgaccctggtc
aggatccgactggagcagatgggtctctacaccgtcactgtccaaaaccaagatgacatt
aaagagatgagctttgacctagaggtgaaagttcctcctcagataactgaactctctgac
catcagctgccgggtaagaagcatgcggtcacctgtgtggcggagggagtgccatctccc
agcattcaatggttcagctgtgaccacatgcccaagtgcagtaacagaagtgtggcgtgg
agccccctggtggaggatcctgagaaagtcaccatccagactaacgtcagctacaacatc
acacgcaagatccaccaggtgcacagtcaggtgactctcctgcggccgcagctgctcacc
atccgctgcgaggcccgcaacgagagaggagctcgagccagagacccagaggtcacatca
gagtaactggtgtcgtttttttctcaagtggccgttctcgccgcagtcttagcactggtg
gtcatcgccattatatccatcatcatcctcatcgctgtgtggaggaaggtcaaaccacgc
tatgaaatcagatggaaggtgattgaatcggtcagtttggatggacacgagtacatctac
gtcgaccccattcacctgccctatgacctggcctgggagatgtcgcgggacagtctggtg
ctgggtcggacacttggatctggagcatttgggcgtgttgtcgaggcgacggcgtacgat
ctcggccattcccagtccgctactaaagtggcagtgaaaatgctgaaatcgacggctcgg
aggagcgagactcaagctctgatgtctgaactcaagatcatgagtcatctgggtcctcac
ctcaacatcgtcaacctgctgggcgcctgtaccaaaaacggtcctctgtatctggtgaca
gaatactgccgctatggagatctggttgactatctgcacaggaacaagcacagcttcctc
cagtactacgccgacaagaaccacatcgtcaacggcagccagatctgtaacgacagcgat
atgccgaccgggaaagaatacgtgtcgttcggcagcgagtgtgatggaggatatatggac
atgaccatagacaaacagaccgaatacgtgccgatgcaggagctcacggacaccatcaag
tacgcagatatccagccatcaccctacgagtctccttaccagcaagacatctaccaggag
caaggtcacagggtggatcggtctctggtcatcagtgattctccggttctgagctacact
gatcttgtgggcttcagttatcaggtggccaaaggcatggagttcttggcctcaaagaac
tgtgtgcatcgggatctggcagcaagaaacgtcttgatctgtgagggcaaactggccaag
atctgtgactttggactggccagagacatcatgcatgacaacaactacatctccaaaggc
agcacgtttcttcctctgaagtggatggccccggagagtatctttcataacctgtacacc
acgctgagtgacgtctggtcctacggcatcttactgtgggagattttcactctgggagga
accccgtatccagacctgcccatgaacgagttgttctacagcgctctgaagagaggatac
cgcatggccaaaccctcgtacgcctccgaagacgtttatgaggtcatgaggaaatgttgg
gatgagaagttcgagaagcgtcccgagttctcctttctggtgcacaccatggggaacatg
ctgtcagacggatataaaaagaaatactctcaggtcagcgacagctttctgaagagcgat
caccccgcggtggcccgtgtgaagccgtgtgtcccgtctccgttccccaacgccttccct
cctcagtctccgtcctccgatctgagcccaaaccccaccccgcgcccgcaggccgacgga
gagccgcacaatgagtacatcatccccatccccgatcccaaaccagaggaggagacccag
gacgagccggtgctgatggaaatcccctcgagctcgttaagttctgatgaggagacggtc
tccatggaaaccccgagcaccgaacctgagcacgaggagctgctgccggatcattctgga
agtccagaggtggaggagagcttcctgtga
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