Cyprinus carpio (common carp): 109047698
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Entry
109047698 CDS
T05134
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03440
Homologous recombination
ccar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109047698
03460 Fanconi anemia pathway
109047698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccar03032
]
109047698
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109047698
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109047698
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Topoisomerases
109047698
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109047698
FA (Fanconi anemia) pathway
109047698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
109047698
NCBI-ProteinID:
XP_042576081
Ensembl:
ENSCCRG00000006080
UniProt:
A0A8C1YCX1
LinkDB
All DBs
Position
B3:20178389..20188604
Genome browser
AA seq
1003 aa
AA seq
DB search
MNVLFRSLRVTIDSRFYRQVSVSMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGSSRRREG
YSVYNKIYEYEYHLFGQNVTVSMTSVSGHLLSLEFKAPFQKWHSCNPVLLFDAEVEKYCP
ENFTPIKRTLEREVRQCQALVIWTDCDREGENIGFEVIDVCKAVKPNIQVFRARFSEITP
NSIRRACETLTEPDVNVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPESLSDQLISYGS
CQFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFSWKRHRLFNHTACLVLYQM
CMEDPMAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQGFISY
PRTETNMFPQNLNLTTLVEQQTQDNEWGNFAQRILESGGPTPRNGNKSDQAHPPIHPTKY
TNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVTVEIEIAEERFSASGLTIIARNYLEVYP
YDKWYNKVIPLYTADTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHADHI
ETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDK
ASVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEITEQEQGEMEIPLPVRKCPQCN
RDMVLKKKKDSTRMFLSCMGYPACKAAVWFPDTVLEVSRDESICPTCHPYPVHMLKLKFK
RGSLPPMMPLEFVGCIGGCDETLREVLNLRYIRGGEADSGSRAHNGSGSNQHHVPRTNSA
PPSRVTPPAPGANGSRPTASLPPPRATQPPASAQGGAIVCNCGQDAILLTVRKEGPNQGR
QFYKCNTGDCKFFLWADPPAEQGAPGGSRGPMTQNPQPPRPSAGFGNVPQQRQNNRGSGG
DDGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVAPATVFPGGN
GARPPGNKKASTTSNKPPTAKRPRTCGICHEPGHTRVTCPQGK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttgtttagatcactgagagtgaccatcgacagtcgattttatagacaagta
tctgtaagcatgatcaggcgcacacagattaagaaagtgctctgtgttgccgagaagaac
gatgcagctaagggcatagcagagatcatgtcaaacgggagctcgagaagaagagaaggc
tactctgtttacaataaaatatatgagtacgaataccacctctttggtcaaaatgtaact
gtaagcatgacatccgtgtcaggacatctcttgagtctcgaattcaaagctccctttcag
aaatggcatagttgtaatccagtcctgttgtttgacgctgaggtggagaagtactgccct
gagaactttacacccatcaaaaggactttggagagggaggtgagacagtgccaagctctg
gtcatttggactgattgtgacagagaaggagaaaatatcggctttgaggtcattgatgtt
tgcaaagcagtgaagccaaacattcaggtcttccgtgcacggttctctgagatcaccccc
aactccataaggagagcctgtgagacccttactgagccggacgtcaacgtcagtgatgcg
gtggatgtgagacaggagctggacctccgcatcggggcatcgtttaccaggttccagact
ctacgcttgcagaagatattcccagaatctctctctgatcagctcatcagttatggcagc
tgtcagttcccgacccttggctttgtggtagagcgttttaaagccattcaagcctttgtc
cctgaaactttctttaaaatcaaagttgtccatgagcctaatgaagaggaatcagttgaa
ttcagctggaaaagacatcgccttttcaatcacacagcatgccttgtgctgtatcagatg
tgcatggaggatccgatggcgaaagtgatatctgtaacaagtaaaccaaaaagcaaatgg
cgacctttacctcttgacactgtggaacttgaaaaactggcttcaagaaaactgaggata
agtgccaaagaaaccatgaaaatcgcagaaaagctgtacactcaagggttcatcagttat
cctcgtactgagaccaacatgtttccacagaacctgaacctaaccacgctggttgagcaa
cagacacaagacaacgaatggggaaattttgctcagcgcattttggaaagcggtgggccc
acacctcgaaatggaaacaaatctgatcaggcccatccccccattcaccccactaaatac
accaacagtttacagggaaatgaaaagcggctgtatgagttcatagtacgtcacttcctg
gcctgttgctccaaagatgctcagggacaagaggtgactgtcgagattgaaatagctgaa
gagagattctcagcgagtggattgacgatcattgctcgcaattatctggaagtgtaccct
tacgacaagtggtacaataaggttattccattatatacggctgacaccacgttccagccc
acagcgattgagatggtggaaggacagaccagtccaccccagcttctgacagaggctgat
ttgatatcacttatggagaaacatggcattggtaccgatgcaacacatgctgatcacatt
gagaccataaagagtcgcatgtatgtggggctgacggctgaccagaggttccttcctgga
gaacttggcatgggtctcgttgaagggtataactcaatggggtatgagatgtctaaacca
gacctgagagcagagctggaggctgaccttaaacttgtgtcagagggccgaaaggacaaa
gcctctgtcctcagttatcatgtggccaaatacaaggctgtttttatcgagtccgtgagg
aaggcaaagaaattggatgaggctttgtcaaattatctgggccctgctcaggagattact
gaacaggagcaaggagaaatggagataccattaccagtgcgaaagtgtccccagtgtaac
cgtgacatggtgctgaagaagaagaaagacagcacaaggatgtttctttcatgtatggga
tatcctgcctgtaaagcagccgtgtggtttccagacacagttctggaggtcagcagagac
gagagcatctgtccaacttgccatccgtatccagtgcatatgctgaagcttaaattcaag
aggggaagtttgccacctatgatgccccttgaatttgttggatgcatcggaggatgtgat
gagactctcagagaggtcttaaacttgagatatatccgaggaggagaagcagattctggc
tcgcgggcacataacggctctggatcaaatcagcatcatgtgcctagaaccaactcagca
cctccatccagggttacacctccagcacccggagccaacggcagccgccccacagccagt
ctgccacctccacgggcaacacaaccaccagcttcagcccagggcggggccattgtgtgt
aactgtggtcaggatgccattcttctcactgttcgcaaagagggtcccaatcaaggccgt
cagttttacaagtgtaacacaggagactgtaagttcttcctgtgggctgatccgccggct
gagcagggagcgcccggagggagtagaggacccatgactcagaatccccaacctcccagg
ccctcagctggctttgggaacgtacctcagcagaggcaaaacaacagaggatctggaggt
gatgatggtgagactatgtgtaactgtaatgagcctgcagtgaccaggaccgtcatgaaa
gatgggccaaacaaggggcgaatgttccacacctgcgggaaaccacgtgatcagcagtgt
gggttcttccagtgggcgaacgaaaatgtggctccagccacagttttccctggaggaaat
ggtgccagacctcctgggaacaaaaaggccagcactacctcaaacaagccccccactgcc
aaaaggccgagaacctgtggaatatgtcatgagccgggtcacacacgggtcacctgtcca
cagggcaaataa
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