Cyprinus carpio (common carp): 109049092
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Entry
109049092 CDS
T05134
Name
(RefSeq) RNA-binding motif protein, X chromosome
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109049092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109049092
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
hnRNP proteins
109049092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
Nup35_RRM_2
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
109049092
NCBI-ProteinID:
XP_018922309
Ensembl:
ENSCCRG00000006089
UniProt:
A0A8C1T1Q7
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All DBs
Position
B14:20070275..20076228
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AA seq
380 aa
AA seq
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MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPG
DAKDAAREMNGKPLDGKPIKVEQATKPQFESSGRRGPPPSRSRGPARGPRGSRGAPSGMR
GPPSREPFFKGMSSRGPPPLKRGPPVRNGGPPPKRSAPSGPMGRPPMSRDRDPYGPPRRD
SLMSRRDDGPPPRDDHYSKDSYSSRDYMSSRDGRDYAPPPRDYPYREYSGHSSSRDDYGS
GSRGYSDRDGYGGGREPRGYMDRPSSGSYRDPYDSYGNSRSAPPSRGPPPSYSGSGGSSR
YDDYGSSSRDGYGSRDSYPSSRSDPYSASRGDRLGRQERGPPPPLERGYHREYSSSSRGA
PRGGGRGGGRADRGMARNRY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcagaccgaccagggaagctcttcatcggtggcctgaacactgaaactagt
gagaaggtccttgaagcgtatttcagcaaatttggcagaatatcagaagttctgttgatg
aaggatcgtgagacgaataaatctagaggctttgcatttgtaacttatgaaaatcctggt
gacgcaaaagacgcggcgagggaaatgaatggaaagccccttgatggaaagcctattaaa
gtggaacaggccacaaaacctcagtttgagtcttcaggacgccgtggtccaccaccgtca
cggagtcgtggccctgctagaggtccacgagggtccaggggagcaccaagtggaatgcgg
ggaccacccagcagagaacccttttttaaaggcatgtcatccagagggccaccaccactg
aaaagaggccccccagtgcggaatggaggacccccgcctaagagatctgcaccctctggg
ccaatgggcagaccaccaatgtccagagacagggacccatacggccctcctcgcagagat
tctctgatgtcacgtcgggatgatggtcctccgcctcgtgatgaccactacagtaaagac
agctactccagccgtgactacatgagttcacgggacggtcgagactatgccccgccacca
cgtgattacccataccgggagtattcgggccattccagttctagagatgactatgggtca
ggatccagaggttacagtgatcgtgatggctacggtggaggacgagagcccaggggttac
atggatcggcccagttcaggatcctatagagacccttacgacagttacggtaactcacgc
agcgccccaccctcaaggggtccccctccgtcctacagtgggagtggcggaagcagtcgt
tatgacgactatggcagcagttcccgggatggatatggcagtcgagacagttatcccagc
agtcggagtgacccgtactccgctagtcgtggtgaccgtctgggtaggcaggagagaggg
ccaccccctcctcttgagcgaggctatcatcgtgaatacagcagctcgagccgtggggcg
cctcgaggaggtggccggggcggcggtcgagcagatagaggaatggcccggaacagatac
tga
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