KEGG   Cyprinus carpio (common carp): 109050299
Entry
109050299         CDS       T05134                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109050299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109050299
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     109050299
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 CSTF1_dimer WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_VPS8 Ge1_WD40 PROPPIN Beta-prop_SPT8 DUF7099 Beta-prop_WDR75_2nd Frtz
Other DBs
NCBI-GeneID: 109050299
NCBI-ProteinID: XP_042622428
UniProt: A0A9Q9YLI2
LinkDB
Position
A11:complement(15559399..15562858)
AA seq 431 aa
MFRPKPTLKDRQHLYKLIISQLLYDGYTTVANSLISEVKPQSVVSPSEQLMQLAKIGLEN
DDSAVQYAIGRSDTVAPGVGIDMEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLS
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTICGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVSTF
EKAHDGAEVCSAVFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRTQGV
FNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgttccggcccaagcccacactgaaggacagacagcacctttacaagctgatcatcagc
cagctgctgtatgacggctacaccaccgtcgccaacagcctgatcagtgaggtgaagccc
cagagtgtggtgtctccatcagagcagctcatgcagctggccaaaattggattggagaac
gatgacagtgcggtacagtacgccattggccgttcggacaccgtggcgcccggtgtgggc
atcgacatggagtttgatgcagacgtgcaaaccatgtccccagaagcatcagagtacgag
acctgctatgtgacgtcccataagggtccgtgccgtgtggccacctacagccgggatggg
cagctcattgcgacgggctccgccgatgcctccattaagatcctggatactgagcgcatg
ctggccaaaagcgccatgccgctggaggtgatgatgaacgaaacggcccagcagaacatg
gagaaccaccctgtaatcagaaccttgtatgatcacgtggatgaggtcacatgcctgtct
tttcacccgaccgaacagatcctggcctctggctctcgtgattacaccctcaaactcttt
gattattcaaagccgtcagcaaaaagagccttcaagcacatacaggaagctgaaatgttg
cgctccatctctttccatccgtccggggatttcttactagttggcacgcagcatccaacc
ttgcgtctctatgacgtcaacactttccagtgttttgtgtcctgcaaccctttggatcag
cacacagacaccatctgcggagtctgttacaatcccagcgctaacagctacgtcacctgt
agcaaagacggcagcatcaagttatgggacggcgtgtcaaaccggtgcgtgagcactttt
gagaaagcccacgacggcgctgaggtctgctcggccgtcttctccaaaaattccaaatat
attctgtccagcgggaaggattctgttgctaaactctgggaaatttccacaggccgtact
ctggtcaaatacacaggtgcaggtctcagtgggcgacaaacgcaccgcactcagggtgtt
ttcaaccacactgaggactatgtgctgctgccagacgagcgaaccatcagcttgtgctgc
tgggattcacgcacagctgagaggaagaacctgctctcattaggccacaataacattgtg
cgctgtatcgtacactcgcccacaaaccccggcttcatgacctgcagcgacgacttcaga
gcacgcttctggtatcgccgcaccaccactgactaa

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